Stenotrophomonas sp. P2112: ACEPA4_07225
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Entry
ACEPA4_07225 CDS
T10817
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACEPA4_07225 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stez03400
]
ACEPA4_07225 (uvrB)
DNA repair and recombination proteins [BR:
stez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEPA4_07225 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACEPA4_07225 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AIP3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XGK37067
LinkDB
All DBs
Position
1557615..1559639
Genome browser
AA seq
674 aa
AA seq
DB search
MSDSFELVSPYSPAGDQPNAIAKLTSNFEAGIAKQTLLGVTGSGKTYTIANVIQNVQKPT
LIMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLAATKTLLSRPDAIVVATVSAIYGLGAPEDYLSLRLILSKGERIDQRDLINHLTQLQ
YTRNEYELQRGTFRVRGEVIDVFPAESDSEALRLELFDGEVEKITLFDPLTGETLRNMQR
FTVYPKTHYATTRERVLAAIETIKVELKERLEQLYAQNKLVEAQRLAQRTQFDLEMMAEV
GYCNGIENYSRHLTGKNAGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMFKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEERCPRSIYVSATPGPYELREAGDEITELVVRPTGLID
PVVEIRPVGTQVDDLMSEANARIKAGDRVLVTTLTKRMAENLTEYLTEHGIRVRYLHSDV
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNVRGKAILYADKITRSMQAAIDETDRRRAKQVEYNEEHGIVPRSVARPIVDVLEGA
RSDAAEKEAKKGKGKGRASVAEEAADYRSLSPAQLATRLKALEQQMYQHAKDLEFEDAAR
VRDQIRQLKEASLG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagttttgaacttgtctcgccgtattcgccggcgggcgaccagcccaacgcc
atcgcgaagctgaccagcaacttcgaggccggcatcgccaagcagaccctgctgggcgtg
accggctcgggcaagacttacaccatcgccaacgtcatccagaacgttcagaagccgacg
ctgatcatggcaccgaacaagacgctggcggcgcagctgtatggcgagttcaaggcgttc
ttcccgcacaatgcggtggagtacttcgtcagttattacgactactaccagcccgaagcc
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgaacacatcgag
cagatgcggctggccgcgaccaagactctgctgtcgcgcccggacgcgatcgtggtggcc
acggtgtccgcgatctatggcctgggtgcgccggaagactacctttcactgcgcctgatc
ctgtcaaagggcgagcgcatcgaccagcgcgacctgatcaaccacctgacccagctgcag
tacacgcgcaatgagtacgagctgcagcgcggtaccttccgcgtgcgcggcgaagtgatc
gacgtgttcccggccgagtcggacagcgaagcactgcgcctcgaactgttcgatggcgag
gtcgagaagatcaccctgttcgatccgctcaccggcgagacgctgcgcaacatgcagcgc
ttcacggtttacccgaagacccactatgcgaccacgcgcgagcgcgtgctggcggcgatc
gagacgatcaaggtagagctgaaggagcggctggagcagctctacgcgcagaacaagctg
gtggaggcgcagcgcctggcgcagcgcacgcagttcgacctggaaatgatggccgaggtc
ggttactgcaacggcatcgagaactactcgcggcacctgaccggcaagaatgccggcgag
ccgccaccgaccctgttcgactacctgccgccggatgcgctgctggtgatcgacgaatcg
catgtgaccattccgcagatcggcgccatgttcaagggtgaccgctcgcgcaaggaaacc
ctggttgagttcggtttccgcctgccgtcggcgctggacaaccgcccgctgcgcttcgag
gaatgggaggagcgctgcccgcgcagcatctacgtgtcggccacgcccgggccctatgaa
ctgcgtgaagccggtgacgagatcaccgaactggtggtgcgcccaaccggcctgatcgac
ccggtggtggagatcaggccggtcggtacccaggtcgacgacctgatgagcgaggccaac
gcgcgcatcaaggcgggcgaccgcgtgctggtcaccacgctgaccaagcgcatggctgaa
aacctcaccgagtacctcaccgaacacggtatccgcgtgcgctacctgcactcggacgtg
gatacggtcgagcgcgtggagatcatccgcgacctgcgcctgggcaagttcgacgtgctg
gtcggcatcaacctgctgcgtgaaggcctggacatgcccgaggtatcgctggtggcgatc
ctcgatgccgacaaggaaggcttcctgcgctccaccggctcgctgatccagaccatcggc
cgcgccgcacgcaacgtgcgcggcaaggcgatcctgtacgccgacaagatcacccgctcg
atgcaggcggcgatcgatgagaccgaccggcgccgtgccaagcaggtcgagtacaacgaa
gaacatggcatcgtgccgcgctcggtggcgcgcccgatcgtcgatgtcctcgaaggcgcg
cgttcggatgccgccgagaaggaagccaagaagggtaagggcaagggccgggcgagtgtg
gccgaagaagcggccgactatcgttcgctgtctccggcgcagctggcgacccgtctcaag
gcgctggaacaacagatgtaccagcacgccaaggacctcgaattcgaggatgccgcacgg
gtgcgtgaccagatccggcagctgaaggaagccagcctgggctga
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integrated database retrieval system
