Stenotrophomonas sp. P2112: ACEPA4_08385
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Entry
ACEPA4_08385 CDS
T10817
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
stez Stenotrophomonas sp. P2112
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stez03009
]
ACEPA4_08385 (dbpA)
Enzymes [BR:
stez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACEPA4_08385 (dbpA)
Ribosome biogenesis [BR:
stez03009
]
Prokaryotic type
rRNA helicases
ACEPA4_08385 (dbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
PRAI
Motif
Other DBs
NCBI-ProteinID:
XGK37272
LinkDB
All DBs
Position
complement(1784572..1785948)
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AA seq
458 aa
AA seq
DB search
MTDFSTLPLSPALQPGLDALGYTTLTPVQAQSLPAILDGHDVIAQAPTGSGKTAAFGLGL
LQAVDPSLIRVQALVLCPTRELADQVGKQIRKLATGIPNLKLLLLVGGVPLGPQLASLEG
HDPHVVVGTPGRVQELARKRALNLGAVRTLVLDEADRMLDMGFEEPIREIAGRTHRDRQS
LLFSATFPDSIRAMARDLLRDAVEVTVEGADQAPAIRHLFCEVEPVHRQKALAGLLLKYA
PESAVVFCNTRKDVDEVANSLQQFGFSALALHGDMEQRDREEVLLRLANRSCNVLVASDV
AARGLDVEELAAVINYELPTDVESYQHRVGRTGRAGASGLAISLVAGREKTRAEAIEAQL
GQPLDWQKTPLATSRPAELPQAAMRTLRIDGGKTDKLRPGDILGALTGDAGLSSKFIGKI
AIFPTRSYVAIAREQANKAVARLEAGKIKGRRFRVRMM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttctcgaccctgccgctgagcccggccctgcagcccggcctggacgccctc
ggctacaccaccctcacccccgtgcaggcgcagagcctgccggccatcctcgatggccac
gatgtgatcgcacaggcgccgaccggcagcggcaagaccgccgccttcgggctgggcctg
ctgcaggccgtcgaccccagcctgatccgcgtgcaggcgctggtcctgtgcccgacccgc
gaactcgccgaccaggtcggcaagcagatccgcaagctggccaccggcattcccaacctg
aagctgttgctgctggtaggcggcgtgccgctgggcccgcagctggcctcgctggaaggc
cacgacccgcacgtggtggtgggtacgcccggccgcgtgcaggagctggcacgcaagcgc
gcgctgaacctgggcgcggtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaggagccgatccgcgagatcgccggccgcacccacagggatcgccagagc
ctgctgttctccgccaccttccccgacagcatccgcgccatggcgcgtgacctgctgcgc
gacgcggtggaggtgaccgtggaaggtgccgaccaggcaccggccatccgccacctgttc
tgcgaggtggaaccggtgcatcgccagaaggcgctggccggcctgctgctgaagtacgcg
ccggaatcggcggtggtgttctgcaacacccgcaaggacgtggacgaagtggccaactcg
ctgcagcagttcggcttctccgcactcgccctgcacggcgacatggagcagcgcgaccgt
gaggaagtgctgttgcggctggccaaccgcagctgcaacgtgctggtcgccagcgacgtc
gccgcgcgcggactggacgtggaagagctggcggcggtgatcaactacgaactgccgacc
gacgtggagagctaccagcatcgcgtgggccgtaccggtcgtgccggtgccagcggcctg
gcgatcagcctggtggctggccgcgaaaagacccgcgccgaagccatcgaagcgcagctg
gggcaaccgctggactggcagaagacgccactggcgacctcgcgcccggccgagttgccg
caggcggcgatgcgcaccctgcggattgacggcggcaagaccgacaagctgcgcccgggc
gacatcctcggcgcactgaccggcgatgccggcctgtcgagcaagttcatcggcaagatc
gcgatcttcccgacccgctcctacgtggcgatcgcgcgtgaacaggccaacaaggccgtc
gccaggctggaagccggcaagatcaagggccgtcgcttccgcgtgcggatgatgtga
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