Stenotrophomonas sp. P2112: ACEPA4_09600
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Entry
ACEPA4_09600 CDS
T10817
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez02020
Two-component system
stez02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACEPA4_09600
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ACEPA4_09600
02025 Biofilm formation - Pseudomonas aeruginosa
ACEPA4_09600
09142 Cell motility
02040 Flagellar assembly
ACEPA4_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stez03000
]
ACEPA4_09600
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
stez02035
]
ACEPA4_09600
Transcription factors [BR:
stez03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACEPA4_09600
Bacterial motility proteins [BR:
stez02035
]
Flagellar system
Flagellar assembly proteins
Others
ACEPA4_09600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
AAA_30
AAA_19
bpMoxR
AAA
MCM
Motif
Other DBs
NCBI-ProteinID:
XGK37502
LinkDB
All DBs
Position
complement(2069565..2071070)
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AA seq
501 aa
AA seq
DB search
MSESRILVLDNDAVRAERTVALLEFMDFNPRWVSDAADFDLGRQRQNDWMAVIVGSLDDS
PASTALYNWLGGSSLPPPVLLADGDAAVFAQQHGLHEANIWPLETPLRHAQMEALLRRAS
LKRLDAEHQAGAAQDQGPTGNGPAVSALRTMIEQVAAFDTTVLVLGESGTGKEVVSRAIH
QRSPRRDGPFVAINCGAIPADLLESELFGHEKGAFTGALTARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVVAATHRDLETRIAEGKFREDLFYRLN
VFPIEVPALRERREDLPALVETIAAQLARTGRGEVRFTPEALQALAGYEWPGNVRELTNL
VERLAVLHPGGSVRVQDLPARYRGDAALAAVAALAPAPPAASEERLDLRSFSFHTPGSGN
QPALEHGIAVNRPAAPAALPDEGMDLRNHMASIELGLINEALERTQGVVAHAAQLLGLRR
TTLVEKLRKYGIEREQAELAG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaatcgcgcatcctggtgctggacaacgacgccgtgcgcgcagagcgcaccgtt
gccctgctggaattcatggacttcaatccgcgctgggtgtccgacgcggccgacttcgac
ctgggccggcagcgccagaacgactggatggcggtgatcgtcggcagcctggacgacagc
cccgccagcaccgcgctgtacaactggctgggcggcagcagcctgccgcctccggtgctg
ctggccgatggtgatgccgcagtgtttgcccagcagcacgggctgcatgaagcgaatatc
tggccgctggaaacgccgctgcgccacgcgcagatggaagccctgctgcgccgcgccagc
ctcaagcgcctggatgccgagcatcaggccggcgccgcgcaggaccagggacccaccggc
aacggcccggcagtgagcgccctgcgcaccatgatcgagcaggtggccgcattcgatact
accgtgctggtgctgggtgaatccggtaccggcaaggaagtggtgtcgcgcgccatccac
cagcgttcgccacgccgtgacggaccgtttgtggcgatcaactgcggcgccattccggcc
gacctgctggaaagcgaactgttcggccatgagaagggcgccttcaccggcgcgctcacc
gcgcgcaagggccgtttcgaaatggccgagggcggcaccctgctgctcgacgaaatcggc
gacatgagcctgccgatgcaggtgaagctgctgcgcgtgctgcaggagcgcagtttcgag
cgcgtgggtggcaaccagaccatccgctgcaacgtgcgcgtggtggccgcgacccatcgc
gacctggagacccgcatcgctgagggcaagttccgcgaggatctgttctaccgcctcaac
gtgttcccgattgaagtacccgcgctgcgcgagcgtcgcgaagacctgccggcactggtg
gaaaccatcgccgcgcagctggcccgcactggccgtggcgaagtgcgcttcaccccggaa
gccctgcaggcgctggccggctacgaatggccgggcaacgtgcgcgagctgaccaacctg
gtcgaacgactggccgtactgcatccgggtggctcggtgcgcgtacaggacctgccggcc
cgttatcgtggcgatgcggcactggccgccgtcgctgcgctggcgccggcaccgcccgcc
gccagcgaagagcgactggacctgcgcagcttctccttccacacacccggcagcggcaac
cagccggcgctggaacacggtatcgccgtcaatcgcccggcggcaccggccgcactgccc
gacgagggcatggacctgcgcaaccacatggccagcatcgaactgggcctgatcaacgaa
gcactggaacgcacccagggcgtggtcgcccacgccgcccagctgcttggcctgcgccgc
accaccctggtggaaaagctgcgcaagtacggcatcgaacgcgagcaggccgaactggcc
ggctga
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integrated database retrieval system
