Stenotrophomonas sp. P2112: ACEPA4_10755
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Entry
ACEPA4_10755 CDS
T10817
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACEPA4_10755 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stez03400
]
ACEPA4_10755 (xth)
Enzymes [BR:
stez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACEPA4_10755 (xth)
DNA repair and recombination proteins [BR:
stez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACEPA4_10755 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF7939
Motif
Other DBs
NCBI-ProteinID:
XGK33965
LinkDB
All DBs
Position
complement(2305247..2306038)
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AA seq
263 aa
AA seq
DB search
MARRKMLRIATFNVNGIGTRLPQLLDWLHRESPDVVALQELKATDAAFPASALEEAGYGA
LWQGEARWNGVALLARGTTPVESRRRLPGEPKDTQSRYLEAAAHGIVVGALYLPNGNPQP
GPRFDYKLRWMERLIRHARSLVEQPHPALLLGDFNVIPTDADVYDPKAWRRDALFQPEVR
EAFERLLAQGWTDAVRKVHGDATIYTFWDYFRQHAERDRGLRIDHLLLNPILAGRLKDAG
VDRWVRLQEKASDHAPAWVTVSA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgcaagatgcttcgcattgccacgttcaacgtcaacggcatcggcacacgc
ctgccgcagctgttggactggctgcacagggaatcgccggatgtggttgccctgcaggaa
ctgaaggcgaccgacgccgcgtttccggcttcggcattggaagaggctggctacggcgcg
ctctggcagggcgaggcgcggtggaacggcgtggcgctgctggcacgagggaccacgccg
gtcgagagccgccgccgattgccgggcgagcccaaggacacccagagccgctacctggag
gcggcggcgcatggcattgtggtgggtgcactctacctgcccaacggcaacccgcagccc
gggcccaggttcgactacaagctacgctggatggagcgcctgatccggcatgcgcgcagc
ctggtcgagcagccgcaccctgcgctgctgctgggtgatttcaacgtgattcccaccgac
gccgacgtctacgaccccaaggcctggcgccgcgatgcgctgttccagccagaggtgcgc
gaggcctttgaacgactgctggcgcagggctggaccgatgcggtgcggaaggtgcacggc
gacgccacgatctacaccttctgggactatttccgccagcatgccgagcgcgaccgtggg
ttacgcatcgatcatctgctgttgaaccccatactggcggggcgactgaaggacgctggc
gtcgaccgctgggtacgcctgcaggaaaaggccagcgaccacgcgccggcctgggtgacg
gtaagcgcgtga
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