Stenotrophomonas sp. P2112: ACEPA4_13930
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Entry
ACEPA4_13930 CDS
T10817
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACEPA4_13930 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stez03019
]
ACEPA4_13930 (pnp)
03016 Transfer RNA biogenesis [BR:
stez03016
]
ACEPA4_13930 (pnp)
Enzymes [BR:
stez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACEPA4_13930 (pnp)
Messenger RNA biogenesis [BR:
stez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACEPA4_13930 (pnp)
Transfer RNA biogenesis [BR:
stez03016
]
Prokaryotic type
tRNA degradation factors
ACEPA4_13930 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
S1_2
KH_PNO1_2nd
DUF7680
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
XGK34552
LinkDB
All DBs
Position
complement(2977895..2980003)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEVARQASGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSLN
PDVDGDIPALIGASAALALAGTPFMGPIGAAKVGYKNGEYILNPTVSELADSQLELVVAG
TSNAVLMVESEAALLSEDVMLGAVTFGHREMQKVINAINELTVEAGTKPSTWEAPAKNDA
LISALKEAIGPRLGEAFQVRDKLQRRDAISAIKKDVFEALAGRVAAEGWNPAELSKEFGE
LEYRTMRDSVLDTKVRIDGRALDTVRPIAVKTGVLPRTHGSSLFTRGETQAIVTITLGTA
RDGQVIDAVAGEYKENFLFHYNFPPFSVGECGRMMGPKRREIGHGRLAKRGVLAVMPSLE
AFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGDRFVVLS
DILGDEDHLGDMDFKVAGTAEGISALQMDIKIEGITEEIMKQALQQAKAGRLHILGEMAH
GLTAPREELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGEGASAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcacgcttgagaccggc
gaagtcgcccgccaggccagcggcgcggtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggccaggacttcttcccgctgaccgtc
gattatcaggaaaagttctacgccggcggccgcatcccgggtggtttcttcaagcgtgaa
ggccgtgcgaccgagaaggaaacgctgatctcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaagactacaagaacgaagtgcagatcatcgccacggtcatgtcgctgaac
ccggacgtggacggcgacatcccggccctgatcggcgcctcggctgccctggccctggcc
ggcaccccgttcatgggcccgatcggcgctgccaaggtcggctacaagaacggcgagtac
atcctgaacccgaccgtcagcgaactggctgactcgcagctggaactggtcgttgccggt
acctccaacgccgtgctgatggtcgaatccgaagccgcgctgctgtccgaagacgtgatg
ctgggcgccgtgactttcggtcaccgcgaaatgcagaaggtcatcaacgcgatcaacgag
ctgaccgtcgaagccggcaccaagccgtcgacctgggaagccccggccaagaacgacgcg
ctgatctccgcgctgaaggaagccatcggcccgcgcctgggcgaagccttccaggtgcgc
gacaagctgcagcgccgtgacgccatctcggcgatcaagaaggacgtgttcgaagccctg
gcgggccgcgtggccgccgaaggctggaacccggccgagctgtcgaaggaattcggcgag
ctggaataccgcaccatgcgtgactcggtgctggacaccaaggtccgtatcgacggccgt
gcgctggacaccgtccgcccgatcgccgtgaagactggcgtgctgccgcgtacccacggt
tcctcgctgttcacccgcggcgaaacccaggccatcgtgaccatcaccctgggcactgcc
cgtgatggccaggtcatcgatgccgttgccggtgagtacaaggaaaacttcctgttccac
tataacttccctccgttctcggtgggcgagtgcggccgcatgatgggcccgaagcgccgc
gaaatcggccacggtcgtctggccaagcgcggcgtgctggctgtcatgccgtcgctggaa
gccttcccgtacaccatccgcgtcgtctcggaaatcaccgagtcgaacggttcttcgtcg
atggcgtcggtctgcggctcgtcgctggccctgatggacgccggcgtgccggtgaaggca
ccggtggccggtattgccatgggcctggtcaaggaaggcgaccgtttcgtggtcctgtcc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgct
gagggcatctccgccctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggccctgcagcaggccaaggctggccgtctgcacatcctgggtgaaatggcccac
ggcctgaccgctccgcgtgaggagctgtcggactacgcgccgcgcctgctgaccatcaag
atccacccggacaagatccgcgaagtgattggcaagggtggctcgaccatccaggccatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcgtcg
gtcaacgccatcgctgcccaggctgccaaggcccgcatcgagcagatcacctcggacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
accatcctgccgggcaaggacggcctggtccacgtgtcgcagatctccagcgagcgcgtc
gagaaggtcggcgacaagctgaaggaaggcgatgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatgaaggccgtcgaagaaggcgaaggcgccagc
gccgaataa
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