Stenotrophomonas sp. P2112: ACEPA4_13940
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Entry
ACEPA4_13940 CDS
T10817
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stez Stenotrophomonas sp. P2112
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stez03016
]
ACEPA4_13940 (truB)
Enzymes [BR:
stez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACEPA4_13940 (truB)
Transfer RNA biogenesis [BR:
stez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACEPA4_13940 (truB)
Prokaryotic type
ACEPA4_13940 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XGK34554
LinkDB
All DBs
Position
complement(2980589..2981497)
Genome browser
AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLVQRPVPAISAEALQAALAPLTGNIRQ
RAPIYSALKQGGEPLYVKARRGEAIEAPEREVQVHAIEVLEQLPGRLHLRVTCGSGTYIR
SLARDLGERLGCGAHISALRRLWVEPFRAPAMVTLDQLRAMAEAGDEAGMDALLLPLAAG
LAGYPRVDLDAGQTRRFCVGQRQRDASWPHGLVAVFGPDDAVQGLGQVDDSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagctccaacgccgccctgcaagtggcgcgccgcctgttccgtgccgagaagggtggc
cacaccggcagcctcgacccgttggccaccggcctgctgccactatgcttcggcgaggcc
accaagatcgccggcctgctgctgggttcggccaaggcgtacgatgccgagatcgtcctc
ggccagaccacggataccgatgatgccgagggccaggtgctggtgcagcgcccggtgccg
gcgatcagcgccgaggccctgcaggctgcgctggcgccattgacggggaacatccgtcag
cgggctccgatctattcggcgctgaagcagggcggggaaccgctgtatgtgaaggcccgc
cgcggcgaggccatcgaggctccggagcgcgaggtccaggtgcacgcgatcgaggtgctc
gaacagctgcccgggcgcctgcacctgcgcgtgacctgtggctccggcacctatatccgc
agcctggcccgcgatctcggcgaacgcctgggctgtggcgcccacatcagcgcgctgcgc
cggctgtgggtcgaaccgttccgcgcgccggcgatggtcaccctggaccagttgcgggcg
atggccgaggccggcgacgaggcgggcatggacgcgctgctgctgccgctggcagccggc
ctggctggatacccgcgggtcgacctcgatgccgggcagacccgccgcttctgcgtcggc
cagcgccagcgtgacgcgtcctggccgcatggcctggtggccgtgttcggtccggacgat
gctgtccagggcctgggccaggtcgacgacagtggcctgctggccccgcagcgccgtttc
aacctctga
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