Stenotrophomonas sp. P2112: ACEPA4_15730
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Entry
ACEPA4_15730 CDS
T10817
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACEPA4_15730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
stez02022
]
ACEPA4_15730
02035 Bacterial motility proteins [BR:
stez02035
]
ACEPA4_15730
Two-component system [BR:
stez02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ACEPA4_15730
Bacterial motility proteins [BR:
stez02035
]
Pilus system
Twitching motility proteins
ACEPA4_15730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_19
HTH_50
HTH_30
Motif
Other DBs
NCBI-ProteinID:
XGK34896
LinkDB
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Position
3400402..3401775
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AA seq
457 aa
AA seq
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MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIAQHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHAL
ELNNTERPVPGPAAEQGARLLGDSPAMDVLRTTIGKVARSQAPVYILGESGVGKELVART
IHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYR
INVIELRVPPLRERRQDLPELAASVLARLARSHGRPTPLLAPSALDALAQYAFPGNVREL
ENILERALALAEEDRIGADDLRLPQHAPRTPGSAAHAEAVADLQPGNAALPSYIEQLERS
AIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgcagcgccctcgtcgtcgacgacgaacgcgacatccgcgaactgctg
gtactgacgctcggccgcatggggctgcgcatcagtaccgcagccaaccttgccgaagcg
cgcgaactgctggccagcaatccgtacgacctgtgcatcaccgacatgcgcctgccggac
ggcaacggcatcgagctggtcagcgagatcgcccagcactacccgcgcacgccggtggcg
atgatcactgcctttggcagcatggacttggcggtggaagcgctgaaggccggcgccttc
gatttcgtcagcaagccggtggacatcgccgtgctgcgtggcctggtcaagcacgcgctg
gaactcaacaacaccgagcgccccgtgcccggccccgccgccgaacaaggggcgcgcctg
ctcggcgattcgccggccatggacgtgctgcgtaccaccatcggcaaggtcgcgcgcagc
caggcgccggtctacatcctcggtgaatccggcgtgggcaaggagctggtcgcgcgcacc
atccatgcccagggtgcccgcgcggccggcccgttcgtgccggtcaactgcggcgccatt
cccggcgagctgatggagagcgaattcttcggccaccgcaagggcagcttcagcggcgcc
cacgccgacaagcccgggctgttccaggccgcgcatggcggcaccctgttcctggacgaa
gtggccgagctgcccctgcagatgcaggtgaagctgctgcgcgcgatccaggaaaaatcg
gtgcgcgcggtcggtgcggccaacgaagagccggtggacgtgcgcatcctctcggccacc
cacaaggacctggccgaactggtcgaggacggccgtttccgccacgacctctactaccgc
atcaacgtgatcgaactgagggtgccgccgctgcgcgagcgtcgccaggacctgccggaa
ctggccgcgtcggtgctggcacggctggcccgcagccatggccgcccgacgccgttgctg
gcgccgtcggcactggacgcactggcccagtacgccttccccggcaacgtgcgcgaactg
gaaaacatcctggaacgcgcgctggcactggccgaagaagaccgtatcggcgccgacgac
ctgcgcctgccgcagcatgccccgcgcacgcccggcagcgcagcacatgccgaagccgtg
gctgacctgcagcccggcaacgccgccctgccctcgtacatcgaacagctcgagcgcagc
gccatacagcgcgcgctggaagaaaaccgctggaacaagacccgcaccgccgcgcagctg
ggcatcaccttccgcgcgctgcgctacaagctgaagaagctggggatggagtaa
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