Stenotrophomonas sp. P2112: ACEPA4_17790
Help
Entry
ACEPA4_17790 CDS
T10817
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stez Stenotrophomonas sp. P2112
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stez03032
]
ACEPA4_17790
03400 DNA repair and recombination proteins [BR:
stez03400
]
ACEPA4_17790
Enzymes [BR:
stez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACEPA4_17790
DNA replication proteins [BR:
stez03032
]
Prokaryotic type
DNA Topoisomerases
ACEPA4_17790
DNA repair and recombination proteins [BR:
stez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACEPA4_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XGK35287
LinkDB
All DBs
Position
3868869..3871352
Genome browser
AA seq
827 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKN
EKHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERGLVKDKPMQRVVFTEITPR
AIKEAISQPRAIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIAAECAHPSQHFNAKLVKLDGQKFEQFTVTDGDTAEAARMRIQQ
AAQGSLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPSQVARFLTDDERRLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDNKSAEDEDEGRKLPAMKPGDRIPLERILAEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTQYVDYDF
TARLEDELDAVSRGEEEWIPLMARFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEEKPKFASLRPGQSMHTISLEDALELFLMPRALGEDNGE
PVSVGIGRFGPFAKRGSTYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFEGSDI
QVLNGRFGPYISDGRMNGKIPKDREPSSLTLAEVQQLMEETGKPVRKGFGAKKAAAKKAP
AKKAAVKKEAAPKKAAAKKAPAKKAVKKAAAKKAPAKKAVKKTAAKK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgccggccaaggccaagacgatcaacaaatac
ctcggcaaggactacaccgtcctggcctcgtatgggcatgtgcgtgacctgattccgaag
gaaggcgcggtcgacccggacaacgggttcgccatgcactacgacgtgatcgacaagaac
gaaaagcatgtcgatgcgatcgccaaggccgccaagggcgccgacgacatcctgctggca
accgacccggatcgcgagggtgaagcgatcagctggcatatcgccgagatcctgaaggaa
cgcgggctggtcaaggacaagccgatgcagcgcgtggtgttcaccgagatcaccccgcgc
gccatcaaggaagcgatcagccagccgcgtgcgatcgccagcgacctcgtcgacgcccag
caggcccgccgcgcacttgactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtctgccggccgcgtgcagagcccggcgctgcgcatgatcgtc
gagcgcgaggaagagatcgaagccttcatcgcccgcgagtactggtcgatcgctgccgag
tgcgcgcacccgtcccagcacttcaatgccaagctggtcaagctggacgggcagaagttc
gagcagttcaccgtcaccgatggcgacaccgctgaagcggcgcgcatgcgcatccagcag
gccgcgcagggttcgctgcacgtcaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtatgaaggcgtggccatcggcgacgaa
ggcaccgtcggcctgatttcgtacatgcgtacggactcggtgaacctgtcgcaggacgcg
ctggcggaaatccgcgacgtgatcgcccgcgactacggcatcgcctcgctgccggaccag
cccaacacctaccagaccaagtcgaagaacgcccaggaagcgcacgaagccgtacgcccg
acctcggccctgcgcaccccgtcgcaggtcgcccggttccttaccgacgacgagcggcgc
ctgtacgagctgatctggaagcgtgcggtggcctgccagatgatcccggccacgctcaac
accgtcagcgtcgacctgtcggccggcagcgaacacgtgttccgcgccagcggcaccacc
gtggtcgtgcccggcttcctggccgtgtacgaggaaggcaaggacaacaagagcgccgag
gacgaagatgagggccgcaagctgcccgcgatgaagccgggcgaccgcatcccgctggaa
cgcatcctggccgaacagcatttcacccagccaccgccgcgctacaccgaagcggcgctg
gtgaaggcgctggaagagtacggcatcggccgtccctcgacctacgcttcgatcatccag
accctgctgttccgcaagtatgtggaaatggaaggccgtagcttccgcccgtccgacgtg
ggccgcgcggtgtccaagttcctgtccagccacttcacccagtacgtggattacgacttc
accgccaggcttgaggacgagctcgatgccgtctcgcgcggtgaggaagaatggatcccg
ctgatggcccgtttctgggagccgttcaaggaactggtcgaagacaagaaggaatcggtc
gaccgcgccgaggccagtggcgcgcgcgagctcggcaccgaccccaagaccggcaagccg
gtcagcgtgcggctgggtcgtttcgggccgtatgccgccatcggcagcaccgccgaggac
gccgaggaaaagccgaagttcgcctcgttgcgccccggccagtcgatgcacaccatctcg
ttggaagacgcgctggaactgttcctgatgccgcgcgcgctgggcgaggacaatggtgag
ccggtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcacctacgcc
tcactgaagaaggaagacgacccgtacaccatcgacctggcccgcgccgtattcctgatc
gaagagaaggaagagatcgcgcgcaaccggatcatcaaggagttcgagggcagcgacatc
caggtgctgaacggccgcttcggcccgtacatcagcgatggcaggatgaacggcaagatc
cccaaggatcgcgagccgtcatcgctgaccctggctgaagtgcagcagctgatggaagaa
accggcaagccggtgcgcaagggcttcggcgccaagaaggccgctgcgaagaaggcaccg
gccaagaaggctgcggtgaagaaggaagcagcgccgaagaaggccgcggccaagaaagcg
ccggccaagaaggctgtgaagaaagctgccgcaaagaaggcaccggcgaagaaggccgtc
aagaagaccgctgcaaagaagtag
DBGET
integrated database retrieval system
