Stenotrophomonas sp. P2112: ACEPA4_18105
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Entry
ACEPA4_18105 CDS
T10817
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACEPA4_18105 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stez03400
]
ACEPA4_18105 (ung)
Enzymes [BR:
stez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACEPA4_18105 (ung)
DNA repair and recombination proteins [BR:
stez03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACEPA4_18105 (ung)
Prokaryotic type
ACEPA4_18105 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XGK35346
LinkDB
All DBs
Position
complement(3934886..3935599)
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AA seq
237 aa
AA seq
DB search
MMDEVADTPTIQLEPSWKQHVGDYLLQPQMRELSSFLRQRKASGAAVFPPGPQIFAAFDA
TPFEQVKVVILGQDPYHGRGQAHGLSFSVPPGVPVPPSLLNIYKEIESDLGIPRPDHGCL
IPWAQRGVLLLNAVLTVEEGKAGAHQGRGWEGFTDHVVDVLNREREGLVFMLWGAYAQQK
GKVIDTRRHRVLKSPHPSPLSAHRGFLGCRHFSMANEYLQRRGQAPIDWSLPPRSAL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaagtagccgacaccccgacgatccagctggaaccgagctggaagcagcat
gtcggcgattacctgctgcagccgcagatgcgcgagctgtccagcttcctgcgccagcgc
aaggccagtggcgcggcggtgttcccgcccggcccgcagatcttcgccgcgttcgacgcc
acgccgttcgagcaggtgaaggtggtgatcctcgggcaggacccgtatcacggccgcggc
caggcgcatggcctgagtttctcggtgccgccgggcgtgccggtgccgccgtcgctgctg
aacatctacaaggagatcgagagcgatctcggcatcccgcgcccggaccacggctgcctg
attccgtgggcgcaacgtggggtgctgctgctcaatgccgtgctgacggtggaagagggc
aaggctggtgcccaccagggacgtggctgggagggcttcaccgatcacgtggtggatgtg
ctcaaccgcgaacgcgaaggcctggtgttcatgctgtggggcgcctatgcgcagcagaag
ggcaaggtcatcgacacccgtcgccatcgcgtgctgaagtcgccgcacccgtcgccgctg
tcggcccatcgtggcttcctcggctgccggcatttctcgatggccaacgagtacctgcag
cgccgcggccaggccccgatcgactggtcgctgccgccgcgttcggcgctctga
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