Stenotrophomonas sp. P2112: ACEPA4_19580
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Entry
ACEPA4_19580 CDS
T10817
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03420
Nucleotide excision repair
stez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACEPA4_19580 (uvrD)
03430 Mismatch repair
ACEPA4_19580 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stez03400
]
ACEPA4_19580 (uvrD)
Enzymes [BR:
stez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACEPA4_19580 (uvrD)
DNA repair and recombination proteins [BR:
stez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEPA4_19580 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACEPA4_19580 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DUF3553
Motif
Other DBs
NCBI-ProteinID:
XGK35623
LinkDB
All DBs
Position
complement(4250108..4252300)
Genome browser
AA seq
730 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIAWLHEVDGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPHGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPPKQIAWWINAQKDEGRRPQHIQPEPHDAWLETMRQAYIEYQA
RCDRAGLVDFAELLLRAHELLRDNPALLSHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLGLVNELQAQTVHMTLAE
RVDHVLARSQLREHWSKESRNSLDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGMEDGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHASIEAPPVKLGALVTHPKFGEGMVTDYEGSGAHARVQVEFADAGSKWL
VMAYANLTVI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
ccccccggccaccacctggtgctggccggtgccggttccggcaagacccgcgtactcacc
caccgcatcgcctggctgcatgaagtcgatggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgcatcgatgcacagttgccccat
ggcagccgtggcatgtggatcggtaccttccacggcctggccaaccgcctgctgcgcctg
cactggcaggacgcgaagctgcccgaaggcttccaggtgatggattcggacgaccagctg
cggctggtcaagcgcgtggtgcaggcgctggagctggacgacggcaagtacccgcccaag
cagatcgcgtggtggatcaacgcgcagaaggacgagggccgccgcccgcagcacatccag
cccgaaccgcacgacgcgtggctggaaaccatgcgccaggcctacatcgagtatcaggcg
cgctgcgaccgcgccggcctggtcgacttcgccgagctgctgctgcgcgcgcatgaactg
ctgcgcgacaacccggcgctgctgtcgcactaccgcgcccgcttccgcgagatcctggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggtgat
tccggccacgtgttcgtggtcggcgacgatgaccaggccatctacggctggcgcggcgcc
aaggtcgagaacgtgcagggcttcctgcgcgatttcccgggcgcgcagaccatccgcctg
gagcagaactaccgctccaccgccaacatcctcggcgccgccaacgcggtgatcgcgcac
aacccggaccgcatcggcaagcagctgtggaccgacagcggcgacggtgaaccgatcgac
ctgtacgcggcgtacaacgagatggacgaggcgcgctacatcgtcgagcgtgcccgccag
tgggtgcgcgacggtggcagctacaccgaagtggccgtgctctaccgcagcaacgcacag
tcgcgcgcgcttgaagaggcgctgctgagcgaacaggtgccctatcgcgtgtacggcggc
atgcgcttcttcgagcgtgccgaaatcaaggacgcgctggcctacctgcgcctgctgtcc
aaccgcaatgatgacgccgctttcgagcgcgcggtcaacacgcccacccggggcatcggc
gaccgcacgctggacgaagtgcgccgcgaggcgcgcgcccagggcatttcgttgtgggaa
gcgacgatgctggtcacccagggcagcgcgctggccgcacgtgcgcgcaatgcactggcc
ggcttcctggggctggtcaacgagctgcaggcccagaccgtgcacatgaccctggccgag
cgcgtggaccacgtgctggcccgctcgcagctgcgcgagcactggagcaaggaaagccgc
aattcgctggattcggaatcgcgcaccgacaacctcgacgaactggtctcggtcgcttcg
cgcttcgtgcgccgcgccgacgacatcgaggaagtgggcgaggacatggacgagctggtc
gcgttcctggcctacgccgcgctggaggccggtgaaggccaggcgcaggcgggcgaggac
ggcgtgcagctgatgaccctgcactcggccaagggcctggaattcccgctggtgttcctg
gcaggcatggaagacggcctgttcccgagtgcacgttcgctggaagaaagcgggcggctg
gaggaagagcgtcgcctggcctacgtcggcatcacccgcgcgcgccagaagctggtgctg
agctacgccgaatcgcgccgcatccacggccaggacaactacagcctgccgtcgcgcttc
ctgcgcgagattccgcgcgagctgctgcacgaagtgcgcccgaaggtgcaggtctcgcgg
ccggcatcgatgggcgccagccgggtgatgggccacgcctcgatcgaggcaccgccggtc
aagctcggcgcgctggttacccatcccaagtttggcgaaggcatggtgaccgactacgaa
ggcagcggcgcacacgcccgcgtgcaggtcgagtttgccgacgcggggagcaagtggctg
gtgatggcctacgccaacctgacggtgatctga
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