Stenotrophomonas sp. P2112: ACEPA4_19980
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Entry
ACEPA4_19980 CDS
T10817
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
stez Stenotrophomonas sp. P2112
Pathway
stez03440
Homologous recombination
Brite
Enzymes [BR:
stez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACEPA4_19980 (recB)
DNA repair and recombination proteins [BR:
stez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACEPA4_19980 (recB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGK35689
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Position
complement(4348404..4352084)
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AA seq
1226 aa
AA seq
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MSPAFIDERAQCMAVDPYLALPLDGIRLIEASAGTGKTFTLATLFTRLVVEQGLRIGQIL
AVTFTDAATQELRKRIRERLALAARLVDLEPVEGEAPDVRLTREVLQRHLQGGTERATAL
KRRLQVAADEIDLASILTIHGFCTRVLREHALESGHTFDPPELLASDRELLEALAADLWR
VYANDPATLEPLTWLWSTPDALAADLRALLAAPPLHPLPQAVALPDPQAALQSVAEELSA
SVREHGEQFFIDLCDAVDNKWINGVSYKLGWLHPLGRQLLGWAERADPRELLTSERLPAL
LPEALAAKTNKKFAERTPSSPLQAPLARYVALLAERDAWLRATALNFLHVLRDEARQRLQ
ALKRTRRVQTYDDLIDGVALALEGPQRLALVKQLRAQYRIALVDEFQDTDDRQWGIFHTV
FGDSPEVRELGLAPALFLIGDPKQAIYGFRGGDIHTYLKAKRVAQQAPVLDQNFRSRPAV
LRALQALYDNGGEDAFLERGIQFEPVRPGGVRSDADYQRDGHAAPALTLRVLRSGGDKAM
SADASREAAAQACVAAIHQILVEARAGNAVLRGRPVQPGDIAVLVRSHREATLVQRALAA
VGIPAVAAGKQSLFATSEARDLRALLLALLQPADEGRLRAALATVLLGQRASAIAAMEHE
GDLQRGFQAQLLHWRERWQRGGPFAVIADVCAAQGERLLALIDGERRLTNYLQLGELLQE
ASAQALGMHGLLDWLQGQMASADQDDEQQLLRLESDARRVQIITLHKSKGLEYPLVFLPF
VGIDGGAPNTASHCTVHVGGQRQLHWKLGKDEAWEAATAQREREQRAEDARLLYVGLTRA
EHALWIAVGDLAGLGRTRLAPLLGDLQALRAHADVRIDDSEVPAALPQLAAEVEGDLPAV
RALTRRVPHDWWVYSFTQLAHADAGAGSDIEAAATALPAPAADEPTGPELPLEPALPEAA
AEAEDSAPLDPRFMGSRFGNVLHEAMENVDFAAWADWQPGREAPEGQAEVLRKALHDEGY
ADVDLDDGVAVLVPLVGHTLTVPLPEGGALHSLGEGERRAEIDFHFAIEATTVPALLQVL
HAHGVSSGRRGFGQRRRLEGLMTGMIDLTYVRDGRWYVLDYKSNRLPGYSPDLLAIAMRH
SEYDLQALIYTVALHRWLRFRLGAAYDYERDMGGIRYLFCRGLDGTGNGVHVDRFPFALV
DALDALFAGGEQAQAQLAARARGASA
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgccttcatcgatgagcgagcccagtgcatggcggtcgatccctatctggcc
ctgccgctggatggcatccgcctgatcgaagccagcgccggtaccggcaagaccttcacc
ctggccacgctgtttacccgcctggtggtagagcagggcctgcgcatcggccagatcctg
gcggtgaccttcaccgatgcggctacccaggaactgcgcaagcgcatccgcgagcgcctg
gcgctggcggcgcgactggtcgatctggaaccggtcgaaggcgaagcaccggacgtgcgg
ctgacccgcgaggtgctgcagcgccatctgcagggaggtaccgagcgcgccaccgcactg
aagcgccgcctgcaggtcgccgccgatgagatcgaccttgcgtccatcctcaccatccat
ggcttctgcacccgcgtgctgcgcgagcatgcgctggagagcggccacacctttgatccg
ccggagctgctggccagcgaccgtgagttgctggaagcgctcgcggccgacctgtggcgg
gtatatgccaatgacccggccacgctggaaccgctgacctggctgtggtccaccccggac
gcactggccgccgatctgcgcgcgctgctggccgcgccgccgctgcacccgttgccacag
gcggtggcgctgcccgatccgcaggccgccctgcagagtgttgccgaagagctgtccgca
agcgtgcgcgagcatggcgagcagttcttcatcgacctctgcgatgcggtcgacaacaaa
tggatcaacggcgtgtcgtacaagctgggctggctgcacccgctgggccggcaactgctg
ggctgggccgaacgcgccgacccgcgcgagctgctgaccagcgagcgcctgccggcactg
ctgccggaggcgctggcagccaagaccaacaagaaattcgccgagcgcacgccatcgtcg
ccattgcaggcgccgttggcccgctatgtcgcgcttctggccgaacgcgatgcctggctc
cgtgccaccgcgttgaacttcctgcacgtgcttcgcgacgaagccagacagcgccttcag
gcgctcaagcgcacccgccgggtgcagacctacgacgatctgatcgatggcgtcgcactg
gccctggaaggcccgcagcgcctggcattggtcaagcagctgcgcgcgcagtaccgcatc
gcgctggtcgatgagttccaggataccgacgaccgtcagtggggcattttccacaccgtg
ttcggcgattcaccggaagtgcgcgagctcggcctggcaccggcgctgttcctgatcggc
gatcccaagcaggcgatctacggtttccgcggcggtgatatccacacttacctgaaggcc
aagcgggtagcgcaacaggcgccggtgcttgaccagaacttccgctcgcgaccggccgtg
ctgcgcgcgctgcaggcgctgtacgacaacggtggcgaagacgccttcctcgagcgtggc
atccagttcgagccggtgcggcccggtggcgtgcgcagcgatgcggactaccagcgcgac
ggccatgctgccccggcactcactctgcgcgtgctgcgcagtggcggtgacaaggcgatg
agtgccgatgcctcgcgcgaagcagccgcccaggcctgtgtggcggcgatccaccagatc
ctggtcgaggcgcgcgccggcaatgcggtgctgcgtgggcgcccggtacagccgggtgac
atcgcggtgctggtgcgttcgcatcgcgaggccacgctggtgcagcgcgcgctggccgcg
gtcggcattcctgccgtggcagcgggcaagcagagcctgttcgccaccagcgaagcgcgt
gatctgcgtgcactgctgctggcgctgctgcagccggctgacgaaggtcgcctgcgcgca
gcgctggccacagtgctgctcggccagcgcgccagtgcgatcgcggcgatggagcacgag
ggcgacctgcaacgcgggttccaggcgcagctgctgcattggcgcgagcgctggcagcgc
ggcggcccgttcgcggtgatcgccgacgtctgcgccgcgcagggcgagcgcctgctggcg
ctgatcgatggcgagcgccgcctgaccaactacctgcagctgggcgaactgctgcaggaa
gcctcggcgcaggcgctgggcatgcacggcctgctggactggctgcagggccagatggcc
agcgccgaccaggatgacgagcagcagctgctgcgcctggaatcggatgcgcgccgcgtg
cagatcatcaccctgcacaagagcaagggcctggagtacccgctggtgttcctgcccttc
gtgggcatcgacggcggtgcgcccaacaccgcctcgcactgcacggtgcatgtgggcggc
cagcgccagctgcactggaagctgggcaaggacgaggcctgggaagcggccactgcgcag
cgcgagcgcgagcagcgtgccgaggatgcccgcctgctgtatgtcggcctgacccgcgcc
gagcacgcgctgtggatcgccgtgggtgatctggccgggctcggcaggacgcggctggca
ccgctgctgggtgacctgcaggcgctgcgcgcgcatgccgatgtgcgcatcgatgacagt
gaggtaccggctgcgctgccgcagctggcggccgaagtggaaggggatcttccggcggtg
cgtgcactgacccggcgcgttccgcacgactggtgggtgtacagcttcacccagctggcc
cacgccgatgccggcgcgggcagtgacatcgaagccgctgccaccgcgctgccggcgccg
gcagccgacgaacccaccggcccggagctgccgctggaaccggcactgccggaagccgcc
gcggaggccgaggacagcgcgccgctcgacccgcgtttcatgggcagccgcttcggcaac
gtgctgcacgaggcaatggaaaacgtcgacttcgccgcatgggctgactggcaaccaggc
cgggaagctcccgagggccaggccgaggtgctgcgcaaggcgctgcacgatgagggctat
gccgacgtcgatctggacgatggcgtggcggtgctggtgccgctggtgggccacacgctg
accgtaccgctgcccgaaggcggtgcgctgcacagcctcggtgaaggcgagcgccgcgcc
gaaatcgacttccatttcgccatcgaggcgaccaccgtgccggcgctgctgcaggtgctg
catgcgcatggtgtttccagtggccgccgcggcttcggccagcgccgccgcctggagggg
ctgatgaccggcatgatcgacctgacctacgtgcgtgatggccggtggtacgtgctcgac
tacaagtccaaccgcctgcccggctacagcccggacctgctggccattgccatgcgccac
agcgaatacgatctgcaggcgctgatctacaccgtggccctgcatcgctggctgcgcttc
cgcttgggcgccgcctacgactacgagcgcgacatgggcggcatccgttacctgttctgc
cgcggcctggatggcacgggcaacggcgtgcacgtggatcgtttcccgttcgcgctggtg
gatgcactcgacgcgctgttcgccggcggcgagcaggcccaggcccagctcgccgcgcgt
gcccgaggagccagcgcatga
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