KEGG   Streptococcus salivarius 57.I: Ssal_00110
Entry
Ssal_00110        CDS       T02088                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
stf  Streptococcus salivarius 57.I
Pathway
stf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:stf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Ssal_00110 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stf03021]
    Ssal_00110 (rpoA)
   03400 DNA repair and recombination proteins [BR:stf03400]
    Ssal_00110 (rpoA)
Enzymes [BR:stf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Ssal_00110 (rpoA)
Transcription machinery [BR:stf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Ssal_00110 (rpoA)
DNA repair and recombination proteins [BR:stf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Ssal_00110 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Mg_chelatase_C SusF_SusE
Other DBs
NCBI-ProteinID: AEJ52534
LinkDB
Position
95017..95955
AA seq 312 aa
MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVQGPAEVTAGDILTDSDIEIVN
PDHYLFTIADGASLKATMTVATNRGYVPADENKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTDVAKATDVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaaa
tttgtcatcgaaccactagaacgtggttatggtacaactttgggtaactctcttcgtcgt
gtacttttgtcatcacttccaggtgctgccgtaacatcaattaagattgatggagtactc
cacgaatttgataccgtaccaggcgtccgtgaagacgtgatgcaaatcatccttaatatt
aaaggacttgctgtaaaatcttacgtcgaagacgaaaagacaattgaacttgatgtccaa
ggtccagctgaagttactgctggagacatcttgactgatagcgacattgaaattgttaac
cctgatcattatcttttcactatcgctgacggcgcttctttgaaagcgactatgacagta
gctacaaaccgtggttatgttccagcagatgaaaacaagaaagatgatgcaccagtggga
acattggctgtagattcaatctacacaccagtgaaaaaagtcaattatcaagttgaacct
gcccgtgtaggtagcaatgatggttttgataaattgacaatcgaaatcatgacaaatgga
acaatcatccctgaagatgccctcggtctctcggctcgcgttttgattgaacacttgaac
ttgtttactgaccttactgatgttgctaaagctactgatgtaatgaaagaaactgaaaaa
gtgaacgatgaaaaggtgcttgaccgtaccatcgaagaacttgatttgtctgtacgctca
tataactgtttgaaacgtgccggtattaataccgttcatgatttgacagaaaaaactgag
cctgaaatgatgaaagtccgtaacctaggtcgtaaatctcttgaagaagtcaaagttaag
ttggctgatcttggacttggactcaaaaacgataaataa

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