Streptococcus salivarius 57.I: Ssal_00110
Help
Entry
Ssal_00110 CDS
T02088
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stf
Streptococcus salivarius 57.I
Pathway
stf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ssal_00110 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stf03021
]
Ssal_00110 (rpoA)
03400 DNA repair and recombination proteins [BR:
stf03400
]
Ssal_00110 (rpoA)
Enzymes [BR:
stf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ssal_00110 (rpoA)
Transcription machinery [BR:
stf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ssal_00110 (rpoA)
DNA repair and recombination proteins [BR:
stf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ssal_00110 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Mg_chelatase_C
SusF_SusE
Motif
Other DBs
NCBI-ProteinID:
AEJ52534
LinkDB
All DBs
Position
95017..95955
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVQGPAEVTAGDILTDSDIEIVN
PDHYLFTIADGASLKATMTVATNRGYVPADENKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTDVAKATDVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaaa
tttgtcatcgaaccactagaacgtggttatggtacaactttgggtaactctcttcgtcgt
gtacttttgtcatcacttccaggtgctgccgtaacatcaattaagattgatggagtactc
cacgaatttgataccgtaccaggcgtccgtgaagacgtgatgcaaatcatccttaatatt
aaaggacttgctgtaaaatcttacgtcgaagacgaaaagacaattgaacttgatgtccaa
ggtccagctgaagttactgctggagacatcttgactgatagcgacattgaaattgttaac
cctgatcattatcttttcactatcgctgacggcgcttctttgaaagcgactatgacagta
gctacaaaccgtggttatgttccagcagatgaaaacaagaaagatgatgcaccagtggga
acattggctgtagattcaatctacacaccagtgaaaaaagtcaattatcaagttgaacct
gcccgtgtaggtagcaatgatggttttgataaattgacaatcgaaatcatgacaaatgga
acaatcatccctgaagatgccctcggtctctcggctcgcgttttgattgaacacttgaac
ttgtttactgaccttactgatgttgctaaagctactgatgtaatgaaagaaactgaaaaa
gtgaacgatgaaaaggtgcttgaccgtaccatcgaagaacttgatttgtctgtacgctca
tataactgtttgaaacgtgccggtattaataccgttcatgatttgacagaaaaaactgag
cctgaaatgatgaaagtccgtaacctaggtcgtaaatctcttgaagaagtcaaagttaag
ttggctgatcttggacttggactcaaaaacgataaataa
DBGET
integrated database retrieval system