Streptococcus salivarius 57.I: Ssal_00224
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Entry
Ssal_00224 CDS
T02088
Symbol
cbf
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
stf
Streptococcus salivarius 57.I
Brite
KEGG Orthology (KO) [BR:
stf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stf03019
]
Ssal_00224 (cbf)
Messenger RNA biogenesis [BR:
stf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ssal_00224 (cbf)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AEJ52638
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All DBs
Position
205409..206350
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AA seq
313 aa
AA seq
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MKINQMKKDEYFEGFYLIKRAEVRKTRAGKDYIAFTFQDDTGEISGNLWDAQPYNVEEFT
AGKVVHMEGRREVYNNTPQVNQITLRLPTFGEPNDPADFKEKPPVNPSEVREYLEQMIFK
IEKATWQRVVRALYRKYNKEFFTFPAAKTNHHAFESGLAYHTATMVRLADSIGDIYPELN
KSLLFAGIMLHDLAKVIELTGPENTEYTVRGNLIGHIALIDEEITKVLMELNIDDTREDV
VVLRHVILSHHGQLEYGSPVRPRIMEAEIIHMIDNLDASMMMMTTALNLVGPGEMTNRLF
AMDNRSFYKPKFD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaatcaaatgaaaaaagacgagtattttgaaggtttttatctgattaagcgt
gcagaggtacgtaagacaagagcaggaaaggattacattgcctttacattccaggatgat
actggagagatttcaggcaacctatgggatgctcagccttataatgtcgaagaatttacc
gcaggtaaagtagtgcatatggagggccgtcgagaggtttataataatactcctcaggta
aaccaaattaccttacgcttgcctacatttggtgagcccaatgatccagctgatttcaaa
gagaaaccaccagtaaatccttccgaagtacgcgaatacctagagcaaatgattttcaag
attgagaaagcaacttggcagcgtgttgttcgtgccctttatcgcaagtataataaagag
tttttcacttttccagctgctaaaacaaatcatcatgcctttgaaagtggactagcctat
catacagctactatggttcgcctagcggacagcattggagatatttatccggagctcaat
aagagcctactctttgctggaattatgcttcatgatttagctaaggtcattgaacttact
ggtcctgaaaatactgagtatacggttcgtggaaacttgattggtcatattgctttgatt
gatgaagaaatcactaaggtgctcatggagctcaatattgacgatacgcgtgaggatgtc
gttgttttgcgtcatgtcattctcagccaccacggacaactggagtacggtagtccagtg
cgcccccgtattatggaagcagaaattattcatatgattgataatcttgatgccagtatg
atgatgatgacgacagcccttaacctagtaggtccaggagaaatgacaaatcgtctcttt
gctatggataatcgttccttctacaagccaaaatttgattaa
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