Streptococcus salivarius 57.I: Ssal_00342
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Entry
Ssal_00342 CDS
T02088
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
stf
Streptococcus salivarius 57.I
Brite
KEGG Orthology (KO) [BR:
stf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stf03019
]
Ssal_00342
03009 Ribosome biogenesis [BR:
stf03009
]
Ssal_00342
Enzymes [BR:
stf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ssal_00342
Messenger RNA biogenesis [BR:
stf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ssal_00342
Ribosome biogenesis [BR:
stf03009
]
Prokaryotic type
rRNA helicases
Ssal_00342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEJ52740
LinkDB
All DBs
Position
315079..316422
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AA seq
447 aa
AA seq
DB search
MSFKDFNFKTFIQEALDEIKFKEPTPVQQKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLNPKSGDVQVVITAPSRELATQIYQATKQIAKHSDTEIRVVNYVGGTDKQRQIEKLKV
AQPHIVIGTPGRIYDLVKSGDLAIHKAHTFVVDEADMTMDMGFLDTVDKIAASLPKEVQI
LVFSATIPQKLQPFLKKYLTNPVMEQIKTSTVIADTIDNWLVSTKGRNKNEQILEMLKGM
QPYLAMIFVNTKERADDLHSYLVSNGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKM
GITFDPKVYKDGEFQDTYDRDRRANREKAYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
DEKRKRERRAANRAKGRAERKAKKQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattttaattttaaaacatttattcaggaggctcttgacgagattaag
tttaaggagccaacacctgttcaacagaaattgattcctgtagtccgttcaggtcgtgat
ttggttggtgaatcaaagacgggttcagggaagacacataccttccttttgccaattttt
gagaaactcaatccaaagagtggagatgttcaagttgttatcacagcgccatcacgtgaa
ttggcgacacagatttaccaagcgacaaaacagattgctaaacactctgatacagaaatt
cgtgttgttaactatgtgggtggtacagacaagcaacgtcagattgagaaactcaaggta
gcccaacctcatattgttatcggtacaccagggcgtatctatgacctagttaagtctggt
gacttggctatccacaaggcccatacctttgttgttgacgaagctgatatgaccatggac
atgggattcttggatactgtggacaagattgcggcaagccttcctaaagaagtgcaaatt
ttggtcttctcagcaaccattcctcaaaaattacagccattcttgaagaagtatttgacc
aatcccgtcatggaacaaatcaaaacttcaacagttattgctgataccattgataactgg
ttggtatctactaagggtcgcaacaagaatgaacagattcttgagatgcttaaggggatg
caaccatacctggcaatgattttcgttaataccaaggaacgtgcagacgatttgcacagc
tacctagtgtcaaatggtcttaaggttgccaaaattcatggaggtattccaccacgtgag
cgtaagcgtatcatgaatcaagtcaagaagcttgattttgagtacattgtagcgactgac
cttgcagcgcgtgggattgatattgaaggggttagtcatgttatcaacgatgctatccct
caggatttgtctttctttgttcaccgtgtagggcgtacaggacgtaatggtttgtcagga
acagctatcaccctttatcaaccaagtgacgactcagatattcgtgagcttgaaaagatg
gggattacctttgaccctaaagtctataaggacggcgagtttcaagatacttatgaccgt
gaccgtcgtgccaaccgtgaaaaagcctatcaaaaacttgatacggaaatgatcggtttg
gttaagaagaaaaagaaaaaaatcaagcctggctacaagaagaaaattcagtggaaggtt
gacgaaaaacgcaaacgtgagcgtcgtgcggctaaccgtgctaaggggcgtgctgagcgt
aaagctaagaagcaaagtttctaa
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