Streptococcus salivarius 57.I: Ssal_00488
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Entry
Ssal_00488 CDS
T02088
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase, dead/deah box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
stf
Streptococcus salivarius 57.I
Pathway
stf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ssal_00488 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stf03019
]
Ssal_00488 (deaD)
03009 Ribosome biogenesis [BR:
stf03009
]
Ssal_00488 (deaD)
Enzymes [BR:
stf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ssal_00488 (deaD)
Messenger RNA biogenesis [BR:
stf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ssal_00488 (deaD)
Ribosome biogenesis [BR:
stf03009
]
Prokaryotic type
rRNA helicases
Ssal_00488 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEJ52868
LinkDB
All DBs
Position
436740..438326
Genome browser
AA seq
528 aa
AA seq
DB search
MKFTDLNLSEDIQSAVVAAGFEKPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVAPNEMGYLGIIENLTKK
RMKGLKPPTAQEAFQAKKKVALKKIERDFADEAIRSNFDKFKGDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKGGRGNRGRDNNRRGGYRGDRNR
DDRDGGRRDFKRKSKKNSRDFENRGNKRPHRTSSEKKNGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaaaaaccatcacctatccaagagttgacaattccactcgctcttgaaggtaaggat
gttatcggtcaggcccaaactggtactggtaaaacagctgcctttggtttgcctacccta
gataaaattcgtacagaagaaaatacaatccaagcccttgttattgccccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggtcgtgacaaaggcgttaaagtt
cgctcagtctacggtggttctagcattgaaaaacaaatcaaggcccttcgttcaggtgcc
cacatcgttgtagggacaccaggtcgtctccttgaccttatcaaacgtaaggctcttaaa
ctcaataacatcgagactttgattttggatgaagctgatgaaatgcttaacatgggcttc
cttgaagacattgaagctatcattagccgagtaccagaagaacgtcaaactctccttttc
tcagcaactatgcctgatgccatcaaacgtattggtgtgcagttcatgaaagaccctgag
catgtgaaaatcaaggctaaagaattgaccaatgttaacgttgaccaatactttatccga
gtgaaggaacaagagaagtttgataccatgactcgccttatggatgttgaccaaccagaa
ttgtcaattgtctttggtcgtaccaaacgtcgtgtggacgagttgacacgtggcttgaaa
cttcgtggtttccgtgcagagggtatccacggtgaccttgaccaaaacaaacgtcttcgt
gttatccgtgacttcaagaacgaccaaatcgatatcttggttgcgacagacgttgcagcg
cgtggtcttgacatttcaggtgtcactcacgtctacaactacgatattccacaagatcca
gaaagctacgttcaccgtattggacgtacaggacgtgcaggccaatcaggtcaatctatt
actttcgtagcaccaaacgaaatgggttacttgggaatcatcgaaaacttgaccaagaaa
cgcatgaaaggtcttaagccaccaacagctcaagaagccttccaagctaagaagaaagtt
gcccttaagaagatcgaacgcgactttgcggatgaagctatccgttctaactttgacaag
ttcaagggtgatgcggtaaaattggctcaagaattcactcctgaagaattggcactttac
atcttgagcttgaccgttcaagacccagagacaatgccagaagtggaaattgcccgtgaa
aaaccattgccattcaaaccatcaggtggtggctttggtggtaaaggcggcaaaggtggc
cgtggcaaccgtggtcgcgataacaaccgtcgtggtggataccgtggcgaccgtaaccgc
gatgaccgagatggtggccgtcgtgacttcaaacgcaagtctaagaagaatagccgtgac
ttcgaaaaccgtggcaataaacgcccacaccgtacctcaagcgaaaagaaaaacggcttt
gttatccgtaacaagggtgataaataa
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