Streptococcus salivarius 57.I: Ssal_00677
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Entry
Ssal_00677 CDS
T02088
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stf
Streptococcus salivarius 57.I
Brite
KEGG Orthology (KO) [BR:
stf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stf03400
]
Ssal_00677 (sbcC)
DNA repair and recombination proteins [BR:
stf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ssal_00677 (sbcC)
Archaeal homologous recombinant proteins
Ssal_00677 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AEJ53037
LinkDB
All DBs
Position
649130..652309
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGPEDDLTKVTFYFQQGQHLYRIERVLQQERAKRGGGTTIQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMEKRQAQLDGHFASQVWSEEELAVLAQTPASEKLARL
EELLAQRQENLEEQKSILKDAHEDLTKLQKSLQTAQDLAKIFQELEQAKERYRLEIEEGA
QEQAEAKVHLEELQFAQGMQETISSLKQYQKQLLQLVQDLEIAQEALSAKEQAFEEVKTQ
KEALAAQSEDFLQKEEELEVWKEAIIYAQSLAQEQEKIKQSSANYKQLEESYQQASKEIE
LLSQSLSDLEANRLSLESLHEAEKLLQSVGYSVDKQLAQDLKDIEDLNQELAKTEKRHQT
LSLDSDQAQEILNELEEKLRTTLASRRQLMIAQLQAELEDGQPCMVCGSLDHPKVDGTQV
DEAALKDLMDQVEELQAQKEKQVATLSNRQATLSEVESKRQDLLDQVAKVKLTLQKHYQE
LEEQVKGQFEFDFSEDYEAVRGQTLLSAVEKHYQELQKRYDKEEADLVHCQEELAKAQEK
APDLAKSYQEAKATLYQAKERLKDLKEAHPELESVEVYQERISLAKQELDLYNRQVKENG
EAYNQLHADIQGIKGQLESLTKSKEKTSQEMKRLSAELDQSLKVEGALTNDLEQIQLWLL
EVNKQAIPKLQAQLTSYQTLKQELQTQISKSQELLQNQEKPDLVALTQEVQTGQESYDTQ
LAQVSVMEKGLKDANATYQAAKTLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAISVLEQIGE
NRMVGVISHVDDMKEGIAQQLAIIKSHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccttatcgtaaggaagtcatcaat
ttcacccagtttgaccatgctcccctttttttgattggtggggacacaggggctggtaag
agtactctctttgatgccatgacggtggccttgtttgcgacgaccagtggtgatcgtaat
gttgaggagatgcggtcgacctttgctggtccagaggatgatttgaccaaggtgactttt
tacttccaacagggccagcacctttatcgcattgagcgagttctccagcaggagagggcc
aagcgtggtggtggtacgaccattcaaaaagcgacggcttccttagtcattgtggataag
attggtggtcaggaaattgaaaagcttggggataaaatcaaggaagttagtgaccagatt
gagcagattttgggcctcaatgccgaacaattcaaacagattatcctccttccgcaaaat
gatttcagccgtttcttgaaagaagattccaagaccaagactcaaattttaaagaaaatc
tttggaacaggtatttttgaccgttttcaaaagagtttggaagagcgtcttcgtcagagc
aacaaggatatggagaaacgccaggctcagctagatggccattttgccagtcaggtttgg
tctgaggaagaattagctgtcttagcccaaaccccagcttctgaaaaattggcacgtctt
gaagaacttttggcgcaacgtcaagaaaatcttgaagagcaaaaaagcatcttgaaggat
gctcatgaagatttgactaaactgcaaaagagcttacaaactgcccaagatttggctaag
attttccaagaattggagcaagccaaggagcgttaccgtctggaaattgaggagggtgct
caagaacaggcagaggctaaagtgcatctggaggaattgcagtttgcccaagggatgcag
gaaaccattagtagcttgaagcagtatcagaagcagttgttgcaattagtacaggacctt
gagattgctcaggaagcgctaagtgctaaggagcaggcttttgaggaagtcaagactcaa
aaagaggcacttgcagcccaatctgaggattttcttcaaaaagaagaggaactggaagta
tggaaagaggctattatctatgcccagagtctcgcccaagagcaggagaaaatcaaacag
tcaagtgctaactacaagcagttggaagaaagctatcaacaggcttcgaaagagattgaa
ctcctttcccagtccttgtcagatttggaggccaatcgtcttagtttagagagtttacat
gaggctgaaaaactcctccagtctgtgggctacagtgtggataagcaactggctcaggac
ctgaaagacatagaggacttgaatcaggagttggcaaagacggaaaaacgtcatcaaacc
ttatctttggatagtgaccaagctcaagaaatcttaaatgaattggaagagaagttaaga
acgactttggcttcacgtcgtcaactcatgattgctcagttgcaggcagagttagaagat
ggacagccctgtatggtctgtggttccttggatcatcctaaggtcgatgggacacaggtt
gatgaagcggccttgaaggatctcatggaccaggtggaggaacttcaagctcaaaaagaa
aagcaagtcgctaccttgtcaaaccgtcaggctactttgagcgaagttgagtctaaacgt
caagatttgcttgaccaagtggctaaagttaagttaactcttcaaaaacactatcaagaa
ctggaagaacaagttaagggacagtttgaatttgacttttcagaggattatgaagctgtc
cgtgggcaaaccttgttgagtgctgttgagaagcattatcaagaactccaaaaacgctat
gataaggaagaagcagaccttgtccattgtcaagaggagttagctaaagcccaagaaaaa
gcgccagatttggctaagagctatcaagaggccaaggcaactctctatcaagctaaggag
cgcctaaaagacttgaaggaagctcatccagaactggagtctgtagaggtctatcaagaa
cgaatttcccttgcgaagcaggagttggacctctacaataggcaagtcaaggaaaatggt
gaagcctacaaccaacttcatgccgacattcaaggcatcaaggggcagcttgagagcttg
accaagtctaaagaaaagaccagccaagaaatgaaacgtttatcagctgagttggaccaa
agtcttaaggtcgaaggtgccctcaccaatgacctagagcaaatccagctttggctgctt
gaggtgaacaagcaagctattcctaagcttcaggcccaattgacaagttaccaaaccctt
aaacaagaattgcagacccagattagtaagagccaagagcttctccaaaatcaagaaaaa
ccagatttggtcgctttaacacaagaggtccaaaccggtcaggaaagttacgatacgcaa
ttggctcaggtctctgtcatggagaaggggcttaaggatgcgaatgctacctaccaggca
gccaaaacccttcaagacagcaatcaagaggcctttaaggcccaccaagaactcagtgat
ttggtgaaggtggttaagggagaaaatactgctctgactggtcgtctcaatcttgaggtc
tacgttatccgtcagtatttccaacaaatcttggactatgccaatgctaactacatcggt
ctcttaacggataaccgctattcctttgtcttgagtgaggaaggtcgtagggcgcgtgat
cacttcggtttggatatcaacgtctatgaccaactgacaggtagtgaacgctccgttaaa
tccttgtctggtggtgaaacctttatcgctgcactagctattgccctatccctctcagaa
gttgtccaaaataccagcaagggtgctgtcgttgaagctctcttcatcgacgaaggtttc
gggtcactagacaaagaagccctcaccaaggctatctcggtcctagaacaaattggcgaa
aaccgtatggtcggtgtcatcagtcacgtggacgacatgaaagaaggtattgctcagcaa
ctagccatcatcaagtcgcacgatggtagcagccgcattaagattgtggataaggggtga
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