Streptococcus salivarius 57.I: Ssal_01299
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Entry
Ssal_01299 CDS
T02088
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
stf
Streptococcus salivarius 57.I
Pathway
stf03410
Base excision repair
stf03430
Mismatch repair
stf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ssal_01299 (recJ)
03430 Mismatch repair
Ssal_01299 (recJ)
03440 Homologous recombination
Ssal_01299 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stf03400
]
Ssal_01299 (recJ)
DNA repair and recombination proteins [BR:
stf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ssal_01299 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ssal_01299 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ssal_01299 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEJ53583
LinkDB
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Position
complement(1274426..1276651)
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AA seq
741 aa
AA seq
DB search
MTGRKYKNMITSTYDWKINTKEPDAGFFKLAKEHGLAETAAKIAYERGVTTAEALEDFLK
ADLSHLHDPYLLHDMDKAVARIRQAIENYEQILVYGDYDADGMTSASIVKEALEMMGAEA
RVYLPNRFTDGYGPNESVYKYFIEQEGISLIVTVDNGVAGNEAIAYAQEQGVDVIVTDHH
SMPAQLPDAYAIVHPEHPDADYPFKYLAGCGVAFKLATALLETIPTEMLDLVAIGTIADM
VSLTDENRIMVKVGLEILKTTERIGLQELLRISDVDLTTISEETVGFKLAPQLNALGRLD
DPNPAIELLTGFDDEEAQAIALEINAKNEERKEVVQKIFDEAMTMVDLDKPVQVLAKEGW
HPGVLGIVAGRIMEQISQTVVVLNIEDGLAKGSARSLESINIFHALDDHRDIFTAFGGHA
GAAGMTLPEENLGQLSDILCHYVYDNEIDTSAKNTLNLDEELQLSELGLDTIKSLEKLAP
FGMDNKKPVFWLHDITVTQARTMGQNGAHLKFKVKQGKDSFDVVAFNKGNLLQEFQQAQG
LELAVTLSVNVWNGQTTLQLMLEDARVDGVQLFDFRSKNMALPEGVPTVEEAADTEPAVV
LNTLPESATELKEWFEGKDFQAIYFKNNIKEAYYLTGYGTREQFARLYKTIYQFPEFDVR
YKLDELSHYLKIDKILLIKMIQIFDELDFVTIDNGVMTVNKEAEKREIEDSQIFQDLKRL
VKFQELMALGTPQEIYDWLYK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacagggagaaaatataaaaacatgattacatcaacgtatgattggaaaataaacaca
aaagagccagatgctggcttttttaaacttgccaaagaacatggactggcagaaacagca
gccaagattgcttatgaacgtggcgtgacgacagcagaagcccttgaagactttcttaag
gctgatttatcacatcttcatgacccttatcttcttcatgatatggacaaggcagtggct
agaattcgtcaggccattgaaaattatgagcaaatcttagtctatggagattatgatgcg
gatgggatgacgtcagcatcgattgtcaaggaagctcttgaaatgatgggcgctgaagct
cgagtctatttgcctaaccgttttacagatggttatgggccaaacgaaagtgtctataag
tatttcattgagcaggaaggcatttcacttattgttacagtggataatggggttgcggga
aatgaagctattgcttatgcgcaagagcaaggtgtggacgttatcgttacagaccaccat
agcatgccggcacagcttccagatgcctatgccattgtccatccagagcatccggatgcc
gattatccttttaagtatttggcaggatgtggtgtagctttcaaattggcaactgccctc
cttgaaactattcctacagagatgttggatttggtagccattggtaccattgctgatatg
gttagcctaacggatgaaaatcgtattatggtcaaggtcggcctggaaattctcaagact
actgagcgtatcgggcttcaagaattgctccgcatttcagatgtggacctaacaacgatt
tccgaagaaacggtaggtttcaaactagctcctcaactcaatgccttgggacgcttagat
gatccaaatccagccattgaactactgaccggatttgacgatgaggaagctcaggccatt
gctttggaaatcaatgctaaaaatgaagaacgtaaggaagttgttcaaaaaatctttgat
gaagccatgaccatggtagacttggacaaaccagttcaggttttggctaaggaaggttgg
catcctggcgttctaggtattgtggctgggcgcatcatggaacaaatcagccagacagta
gtggttttgaatattgaagatggtctggctaagggttcagcccgtagtttggaatcaatc
aatatcttccatgcccttgatgatcaccgagatatctttactgcatttggaggacacgct
ggagccgctgggatgacccttccggaggaaaatcttggtcaactctcagatattttgtgt
cattatgtctacgataatgagattgatacaagtgccaaaaatacgcttaatttagacgag
gagctccaactcagcgagcttggcttggatactattaagagtctagaaaaactagcacct
tttggtatggataataaaaagccagtcttttggctacatgatattaccgttactcaagct
aggacaatgggacaaaatggggcccatcttaagtttaaggttaagcaaggcaaggatagc
tttgacgttgtcgcttttaataaaggtaatctgcttcaagaatttcaacaagctcaaggt
ttggaattggcagtgaccttgtctgttaatgtttggaatggtcagacaacgctacagctc
atgctagaagatgcgcgtgtggatggtgttcaattatttgatttccgttcaaaaaatatg
gcactacctgaaggcgtaccaacggtagaagaagcagcagacacagaacctgccgttgtc
ctcaacaccctacctgaatcagcgacagaattaaaagagtggtttgaaggtaaagatttc
caggctatctattttaaaaataatataaaggaagcctattatctgacaggttatggaaca
agagagcaatttgcaaggctctataaaaccatttaccaattcccagaattcgatgttcgt
tataaactggatgagcttagtcattaccttaaaatcgacaagattctcctgattaagatg
attcaaatctttgatgaattggactttgtgactattgataatggtgttatgacagtcaat
aaagaagctgaaaaacgtgagattgaggacagtcagattttccaagatctgaaacgactc
gttaagttccaagaacttatggctctgggaacaccacaggaaatttatgactggctttat
aagtag
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