Streptomyces sp. F41: WID27_12530
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Entry
WID27_12530 CDS
T11724
Name
(GenBank) GNAT family N-acetyltransferase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
stfi
Streptomyces sp. F41
Pathway
stfi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
WID27_12530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stfi03019
]
WID27_12530
03009 Ribosome biogenesis [BR:
stfi03009
]
WID27_12530
04131 Membrane trafficking [BR:
stfi04131
]
WID27_12530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stfi04147
]
WID27_12530
Messenger RNA biogenesis [BR:
stfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
WID27_12530
Ribosome biogenesis [BR:
stfi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
WID27_12530
Membrane trafficking [BR:
stfi04131
]
SNARE
SNARE associated proteins
Others
WID27_12530
Autophagy
Aggrephagy
Other aggrephagy associated proteins
WID27_12530
Exosome [BR:
stfi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
WID27_12530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
AAA_28
Acetyltransf_6
AAA_5
AAA_22
AAA_14
AAA_18
AAA_lid_3
AAA_24
RuvB_N
FR47
AAA_33
AAA_17
AAA_16
AAA_25
AAA_30
RNA_helicase
Cytidylate_kin
IPT
DUF5906
NACHT
ABC_tran
nSTAND_NTPase5
SKI
nSTAND3
Vps4_C
AAA_29
IstB_IS21
bpMoxR
TIP49
TsaE
CIS_ATPase_hel
Mg_chelatase
PPV_E1_C
Motif
Other DBs
NCBI-ProteinID:
WYH76177
LinkDB
All DBs
Position
complement(2961869..2963137)
Genome browser
AA seq
422 aa
AA seq
DB search
MAVWHVRDFVPEDLEGVVRLDSESRTSGEPAVFRLSEVVAALQGANPGVVAVAEGQLVGA
AVGRVDGDRAWVLRVALHPAWRNLGLGTALLSALEQRMRAAGAVLVAAVLPEDETGAAAL
VNSGFRLRHGLTYYEKVQPVTAEGSAVLSSLGATVPPAGLWERLAGMAEAKQLVERRIVL
PLANPEAADEHGVEPPQAVVLFGPPGTGKSTFAQAVASRLGWPFVELFPSRLALEDGLAN
GLGRRFEEIAQLDHVLVFIDEVEEVAGARNLADPVSVGVVNELLKSIVRFRDRDGRLLVC
ATNTVAALDPAFLRHGRFDYVLPVGPPDHEARTALWASYLARTGAEADTALLADASEGFT
PADIRQAARTVAQAVFERTLDTGTRAHPTTEDFLRTISRTRPTVTTEMALEFADHTIRYG
RT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtggcatgtgcgggatttcgtacccgaggatctggaaggcgtggtgcgcctc
gactcggagagccgtaccagtggggagcccgccgtgttccggctctccgaggtggttgcc
gcgcttcagggggcgaacccgggggtcgtcgccgtggccgaggggcagctcgtgggggcc
gccgtggggcgggtcgacggggaccgggcgtgggtgctgcgggtggccctgcatccggcc
tggcgcaatctcgggctcgggaccgcgttgctctccgcgctggagcagcggatgcgggcg
gccggggcggtgctggtggcggcggtgctgccggaggacgagacgggggccgccgcgctc
gtgaactccgggttccggctgcgccacgggctcacgtactacgagaaggtccagcccgtc
accgccgaggggtccgccgtcctctcctcgctcggcgcgaccgtgcccccggccgggctc
tgggagcggctcgccgggatggccgaggcgaaacagctcgtcgagcggcggatcgtcctg
ccgctggccaaccccgaggcggccgacgagcacggcgtcgaaccaccgcaggccgtcgtc
ctgttcgggcccccgggcaccggcaagagcaccttcgcgcaggccgtcgcctcccggctc
ggctggcccttcgtggagctgttcccctcccggctcgccctggaggacgggctcgccaac
gggctcggccgccgcttcgaggagatcgcccagctcgaccacgtcctggtcttcatcgac
gaggtggaagaggtcgcgggggcccgcaacctcgccgaccccgtctccgtgggtgtcgtc
aacgaactgctcaagtccatcgtgcggttccgcgaccgcgacgggcggcttctcgtctgc
gccaccaacaccgtcgccgcgctggaccccgcgttcctgcggcacggccgcttcgactac
gtcctgcccgtcggtccgcccgaccacgaggcccgcaccgcgctctgggccagttatctc
gcccggaccggggccgaggccgacaccgccctcctcgccgacgccagcgaggggttcacg
cccgccgacatccgccaggccgcccggaccgtcgcccaggccgtcttcgagcgcaccctc
gacaccggcacccgggcccaccccaccaccgaggacttcctgcgcaccatcagccgcacc
cggcccacggtcaccacggagatggcgttggagttcgcggaccacaccatccggtacgga
cgtacatga
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