Streptomyces sp. Go40/10: KBP30_11835
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Entry
KBP30_11835 CDS
T11184
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
stgo Streptomyces sp. Go40/10
Pathway
stgo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stgo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KBP30_11835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stgo03021
]
KBP30_11835
Transcription machinery [BR:
stgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KBP30_11835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Motif
Other DBs
NCBI-ProteinID:
UFR01833
LinkDB
All DBs
Position
complement(2861853..2863187)
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AA seq
444 aa
AA seq
DB search
MVSAAEPKRTRKSVAAKSPAKRTATKTVAAKTVTTRKATATTAAPAAPAAPAAADSAEET
APAKKAAAKKVAAKKTVAKKAVAKKTAAKKTTAKKDDVELLDEEVLEDTKVADEPEGTES
AGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAE
DKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEG
NLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQR
QMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEA
VVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIR
QIESKTMSKLRHPSRSQVLRDYLD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgccgcagagcccaagcgcacccgcaagagcgtcgcagcgaagagcccggct
aagcgcaccgccaccaagacggtcgcggcgaagacggtgaccaccaggaaggccaccgcg
accacggccgcccccgcggcgcccgccgccccggccgcagctgattccgccgaggaaacc
gcacccgccaagaaggccgccgccaagaaggtggccgcgaagaagacggtcgccaagaag
gccgtcgcgaagaagacggccgcgaagaagaccacggccaagaaggacgacgtcgagctt
ctcgacgaggaggtcctggaggacaccaaggtcgccgacgagcccgaggggaccgagagc
gccggcttcgtcctgtccgacgaggacgaggacgacgcgcccgcgcagcaggtcgccgcg
gccggtgccaccgccgacccggtcaaggactacctgaagcagatcggcaaggtccccctg
ctcaacgccgagcaggaggtcgagctggccaagcgcatcgaggcgggtctgttcgccgag
gacaagctggcgaactccgacaagctcgccccgaagctcaagcgcgagctggagatcatc
gccgaggacggccgccgcgccaagaaccacctcctggaggccaacctccgtctggtggtc
tccctggccaagcgctacaccggccgcggcatgctcttcctggacctcatccaggagggc
aacctcggtctgatccgcgcggtcgagaagttcgactacaccaagggctacaagttctcc
acgtacgccacctggtggatccgccaggcgatcacccgcgccatggccgaccaggcccgc
accatccgtatcccggtgcacatggtcgaggtcatcaacaagctcgcgcgcgtgcagcgc
cagatgctccaggacctgggccgcgagcccaccccggaggagctggccaaggaactggac
atgaccccggagaaggtcatcgaggtccagaagtacggccgcgagcccatctcgctgcac
accccgctgggcgaggacggcgacagcgagttcggtgacctcatcgaggactccgaggcc
gtcgtcccggccgacgcggtcagcttcacgctcctgcaggagcagctgcactcggtcctc
gacaccctgtccgagcgtgaggcgggcgtcgtctccatgcgcttcggtctcaccgacggt
cagccgaagaccctcgacgagatcggcaaggtgtacggcgtgacgcgtgagcgcatccgc
cagatcgagtccaagaccatgtcgaagctgcgccacccgtcgcgttcgcaggtgctgcgc
gactacctcgactag
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