Streptomyces sp. Go40/10: KBP30_11965
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Entry
KBP30_11965 CDS
T11184
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
stgo Streptomyces sp. Go40/10
Pathway
stgo00300
Lysine biosynthesis
stgo00470
D-Amino acid metabolism
stgo01100
Metabolic pathways
stgo01110
Biosynthesis of secondary metabolites
stgo01120
Microbial metabolism in diverse environments
stgo01230
Biosynthesis of amino acids
Module
stgo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stgo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KBP30_11965 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KBP30_11965 (dapF)
Enzymes [BR:
stgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KBP30_11965 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UFR01859
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Position
complement(2902052..2902921)
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AA seq
289 aa
AA seq
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MSTRIAFLKGHGTENDFVIVPDPENTLHLSPAAVAALCDRRAGIGGDGVLHVVRSAAHPE
AREMAAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQHAGHVAEGDLTIATRAGVRTVHI
AKDGDVTVGMGRARLPEGDVTVTVGGRSWPARNVNMGNPHAVAFVADLAHAGDLYTAPPV
SPATAYPDGVNVEFVVDRGPRHVAMRVHERGSGETRSCGTGACAVAVATARRDGTDPAVT
GTPATYTVDVPGGRLVITERPDGEIEMTGPAVIVAEGEIEGEWLAHAVG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcggatcgccttcctcaagggtcacggcaccgagaacgacttcgtgatcgtc
ccggaccccgagaacaccctccacctgtccccggccgccgtcgccgccctgtgcgaccgc
cgggcgggcatcggaggcgacggtgtgctgcacgtcgtacggtccgcggcgcacccggag
gcccgggagatggccgccgaggccgagtggttcatggactaccgcaacggcgacggctcg
gtcgccgagatgtgcggcaacggcgtccgtgtgttcgcgcgctacctccagcacgccggg
cacgtggccgaaggagacctcacgatcgccacgcgcgcgggcgtgaggaccgtccacatc
gcgaaggacggtgacgtcaccgtcggcatgggccgcgcccgcctccccgagggcgacgtc
acggtgaccgtcggcgggcgcagctggcccgcgcgcaacgtgaacatgggcaatccgcac
gcggtggccttcgtcgccgacctggcgcacgcgggcgacctgtacaccgcgccgccggtc
agcccggcgaccgcctacccggacggggtgaacgtcgagttcgtcgtggaccgcggcccc
cgtcacgtcgccatgcgcgtgcacgagcgcggctccggcgagacccgttcgtgcggcacg
ggcgcctgtgccgtcgccgtggccaccgcccggcgcgacggcaccgacccggccgtcacc
ggcaccccggcgacgtacaccgtggacgtgcccggcgggcgcctcgtcatcaccgagcgc
cccgacggcgagatcgagatgaccgggcccgccgtgatcgtcgccgagggcgagatcgag
ggggagtggctcgctcacgctgtcggctga
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