KEGG   Streptomyces sp. Go40/10: KBP30_12265
Entry
KBP30_12265       CDS       T11184                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
stgo  Streptomyces sp. Go40/10
Pathway
stgo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stgo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KBP30_12265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stgo03019]
    KBP30_12265
Messenger RNA biogenesis [BR:stgo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KBP30_12265
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: UFR01911
LinkDB
Position
complement(2973309..2974994)
AA seq 561 aa
MSHPHPELGPPPPLPKGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFSSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGNRERIGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDNRLTDLHAFARLSEEGIDLLLTDSTNAEVPGFTPHERDISNVLRQVFAGARKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPD
HEVVLVCTGSQGEPMAALSRMANRDHQIRIVDGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGALTGVPHD
RIVIAEDGVAVDLVEGKAKISGKVQAGYVYVDGLSVGDVGEPALKDRKILGDEGIISVFV
VMDASTGKITGGPHVQARGSGIEDSAFTDVIPKITEVLERSAQDGVVEPHQLQQLVRRTL
GKWVSDTYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcatcctgaactcggcccgccgccgccgctccccaagggcggcctgcgc
gtcaccccgctcggcggcctcggtgagatcggccggaacatgacggtcttcgagtacggc
ggccgcctgctgatcgtcgactgcggagtgctcttcccggaggaggagcagcccggaatc
gacctgatcctgccggacttctcgtccatccgggaccgtctggacgacatcgagggcatc
gtcctcacccacggccacgaggaccacatcggcggcgtccccttcctgctccgcgagaag
ccggacatcccgctgatcggctccaagctcacgctggccctcatcgaggccaagctgcag
gagcaccggatccggccgtacaccctggaggtggcggagggcaaccgcgagcgcatcggc
cccttcgactgcgagttcatcgccgtcaaccactccatcccggacgccctggccgtcgcc
atccgcacccccgccggcatggtggtccacaccggcgacttcaagatggaccagctcccg
ctggacaaccgcctcaccgacctgcacgccttcgcgcggctgagcgaggagggcatcgac
ctcctcctcaccgactccacgaacgccgaggtccccgggttcaccccgcacgagcgcgac
atctccaacgtcctgcggcaggtcttcgccggcgcccgcaagcggatcatcgtggcgagc
ttcgccagccacgtccaccgcatccagcagattctggacgcggcccacgagtacggccgc
cgggtcgccttcgtcggccggtccatggtccgcaacatgggcatcgcccgggacctcggc
tacctgaaggtgccgccgggcctggtggtcgacgtcaagacgctggacgacctgcccgac
cacgaggtggtcctggtctgcacgggctcccagggcgagccgatggcggccctgtcccgc
atggccaacagggaccaccagatccggatcgtcgacggcgacacggtcatcctggcctcg
tccctcatccccgggaacgagaacgcggtctaccgcgtgatcaacggcctgacccgctgg
ggcgccaacgtcgtccacaagggcaacgccaaggtgcacgtctccggccacgcgtcggcg
ggcgagctgctgtacttctacaacatctgccgcccgaagaacctcatgccggtccacggc
gagtggcgccacctgcgggccaacgccgagctgggcgccctgaccggcgtcccgcacgac
cggatcgtcatcgccgaggacggcgtggcggtcgacctggtcgagggcaaggccaagatc
tccggcaaggtccaggccggttacgtctacgtcgacggcctctcggtcggcgacgtcggc
gagccggcactgaaggaccgcaagatcctcggtgacgagggcatcatctcggtcttcgtg
gtcatggacgcctccaccggcaagatcaccggcggcccgcacgtccaggcgcgcggctcc
ggcatcgaggactcggccttcaccgacgtcattccgaagatcaccgaggtcctggagaga
tccgcccaggacggcgtcgtggagccccaccagctccagcaactcgtccgccggaccctc
ggcaagtgggtctcggacacctatcgccgcaggccgatgatcctgcccgtggtcgtcgag
gtctga

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