Streptomyces sp. Go40/10: KBP30_15305
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Entry
KBP30_15305 CDS
T11184
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stgo Streptomyces sp. Go40/10
Pathway
stgo03420
Nucleotide excision repair
stgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBP30_15305
03430 Mismatch repair
KBP30_15305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stgo03400
]
KBP30_15305
Enzymes [BR:
stgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBP30_15305
DNA repair and recombination proteins [BR:
stgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBP30_15305
MMR (mismatch excision repair)
Other MMR factors
KBP30_15305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UFR02465
LinkDB
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Position
complement(3729483..3733181)
Genome browser
AA seq
1232 aa
AA seq
DB search
MSARITDPEQLKQLLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRTALVKAGVTDPDALPPPGHHPAATAPRADASWPDPD
NPPGEPVISTYHAFAGRLLTDHGLRIGLEPSSRLLADATRYQLAARVLREAPGPYPALTR
SFADLVSDLLTLDSELAEHLVDPDELRVWDADLLRTLEGARLTNADLRKVPETAAARREL
ADLVQRYRTAKRRRDLLDFGDQIALSARLARVPEVGRLLREEFRVVLLDEYQDTSVAQRV
LLAGLFGGGTGHPVTAVGDPCQAIYGWRGASVANLDDFPDHFPHADGRPATRQALSENRR
SGGRLLDLANGLAEPLRAMHAGVEALRPAPGAEYDGTVRCALLPTHAEEIDWIADSLAHL
VHTGTPPGEIAVLCRTATDFAEIQGALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQD
PGANAALVRLLTGPRWRIGPRDLALLGRRARLLVAHARVDAADDPDRRLAAAVEGVDPAE
VISLADALDTFLEGSSEEGDDGLPFSPDARVRFARLAAELRDLRRSLSDPLMDVLHRVLA
VTGLEVELSASPHALAARRRETLSNFLDVAASFAASDGEATLLAFLGFLRTAAQYEKGLD
NALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGTFPSAQGREKWTAQAKVLPHALRGDT
DTLPDVDSWDARGMKAFHEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRG
PSDFLKALYDHCAAGYGEIEVWADEPAEDEENPALHTATADQVWPLPLDAAALARRRAAA
ETVLTHLETLAAEPVAPAAPGVPAGRRPALHDPAGDEHPDWPAPPEDDAYGDDPYGDPFT
DEPYDEPYDEPHDAPYDEPHDAPYDDFPPEQDLPPYDDVSDDDFDGDSDENARSAERPVT
VQAPRVPQAPHSPQVPHQASAPQDHPRPAEPLPPASLTPEEARTVASWDRDLDALTGELL
RARQTVTDVPLPATLTASQLLRLAEDPDGLAQELARPMPRPPQPAARRGTRFHAWVEARF
EELTLPLLEPDELPGSDAEIADERDLEALKEAFERTEYARRTPYRVEAPFQLSLAGRVIR
GRIDAVYRHGDGDEATYEIVDWKTNRAHTADPLQLAVYRLAWAEQQGIPPESVTASFLYV
RSGEVVRPEGLPDRDALERLLTGETESTREAS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccgtatcaccgaccccgagcagctcaagcagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcgggcaagaccaccgtgatggcggcccgcgtggtctggctggtcggcaccggacag
gtcgcccccgaacaggtcctcggtctgaccttcaccaacaaggccgccggcgagctggcc
gaacgcgtccgcaccgcactggtcaaggccggcgtcaccgaccccgacgccctcccgcca
cccggtcaccaccccgcggcgacagcgcctcgcgccgacgcctcctggccggacccggac
aacccccccggcgaaccggtcatctcgacgtaccacgccttcgccggccgtctgctcacc
gaccacggcctgcgcatcggcctggaacccagctcccggctgctggccgacgccacccgc
taccagctcgccgcgcgcgtactgcgcgaggcccccggcccctacccggcgctgacccgc
tccttcgccgacctggtcagcgacctcctcaccctcgactccgaactcgccgaacacctg
gtcgaccccgacgaactgcgcgtctgggacgccgacctgctgcgcaccctcgaaggcgcc
agactcaccaacgccgacctgcgcaaggtccccgagacggccgccgcccgccgggaactc
gccgacctcgtccagcgctaccggacggccaaacgccgccgggacctgctcgacttcggc
gaccagatcgccctgtcggcacgccttgcccgcgtccccgaggtgggccgcctgctgcgc
gaggagttccgcgtggtgctcctggacgagtaccaggacacctccgtggcccagcgcgtc
ctcctcgcgggcctcttcggcggcggcaccggccaccccgtgaccgccgtcggcgacccc
tgccaggccatctacggctggcgcggcgcctccgtcgcgaacctggacgacttccccgac
cacttcccccacgccgacggccggcccgccacccggcaggcgctcagcgagaaccgccgc
agcggcgggcgcctgctcgacctcgccaacggcctcgccgagcccctgcgcgccatgcac
gcgggcgtggaggccctccgcccggcccccggcgccgagtacgacggcacggtccgctgc
gccctgctgcccacccacgccgaggagatcgactggatcgccgactccctggcccacctc
gtgcacaccggcaccccgcccggcgagatcgccgtactgtgccggaccgcgaccgacttc
gccgagatccagggcgctctcgtggcccgcgacgtcccggtcgaggtggtcggcctctcc
gggctgctgcacctgcccgagatcgccgacctcgtcgccgtctgcgaggtcctgcaggac
cccggcgccaacgccgcgctggtgcgtctgctgaccgggccgcgctggcgcatcggcccc
cgcgacctcgccctgctcggccgccgggcccgtctgctcgtcgcccacgcgcgcgtggac
gccgccgacgacccggaccgccggctcgccgccgccgtcgagggagtcgacccggccgag
gtgatctcgctcgcggacgccctggacaccttcctggaaggctcctcggaagagggcgac
gacgggctgccgttctcaccggacgcgcgcgtacgcttcgcccggctcgccgccgagctg
cgcgatctgcgccgctcgctgtccgacccgctgatggacgtcctgcaccgggtcctcgcc
gtcaccggcctggaggtggagctgtcggcgtccccgcacgcgctcgccgcccgccgccgg
gagaccctgtccaacttcctggacgtcgccgcctccttcgccgcgagcgacggcgaggcc
accctgctcgctttcctcggcttcctgcgcaccgccgcccagtacgagaagggcctggac
aacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcgcacaagtccaagggc
ctggagtgggacgtcgtggcggtccccggcctggtgaccggcaccttcccgagcgcccag
ggacgcgagaagtggaccgcccaggccaaggtgctgccgcacgccctgcgcggcgacacc
gacaccctgcccgacgtcgacagctgggacgcgcgcggcatgaaggccttccacgaggcc
atgaaggaccaccagcacaccgaggagctgcgcctcggctacgtcaccttcacccgtccc
cgctcgctcctgctcggctccggccactggtggggacccagccagaagaagccgcgcggc
ccctccgacttcctcaaggccctgtacgaccactgcgccgccggatacggagagatcgag
gtctgggcggacgagcccgcggaggacgaggagaacccggccctgcacacggccaccgcc
gaccaggtctggccgctcccgctggacgccgccgccctggcccgccggcgcgccgccgcc
gagaccgtcctcacccacctggagacgctcgccgccgagccggtcgcccccgccgccccc
ggcgtgcccgcaggccgccgccccgccctgcacgacccggccggcgacgagcacccggac
tggcccgcaccaccggaggacgacgcgtacggggacgacccttacggggatccgttcacc
gacgagccgtacgacgagccgtacgacgagccccacgacgcgccgtacgacgagccccac
gacgcgccgtacgacgacttcccgcccgagcaggacctcccgccctacgacgacgtctcc
gacgacgacttcgacggagactcggacgagaacgcccggagcgccgaacggcccgtaacc
gtccaggccccccgcgtcccccaggcccctcacagcccccaggtcccccaccaggcctcg
gccccgcaggaccacccccgtcccgccgagccgctgccccccgcctccctcaccccggag
gaggcccgcaccgtcgcctcctgggaccgtgacctggacgcgctcaccggagagctgctg
cgtgcccggcagaccgtcaccgacgtgcccctgcccgccaccctcaccgcctcccagctg
ctgcggctcgccgaggacccggacgggctcgcgcaggaactcgcgcgccccatgccgcgc
cccccgcaaccggccgcgcgccggggcacccggttccacgcatgggtggaagcccgcttc
gaggagctgacgctgcccctgctggagccggacgagctgcccggcagcgacgccgagatc
gccgacgaacgcgacctggaagccctcaaggaggccttcgaacgcaccgagtacgcccgg
cgcaccccctaccgggtcgaggccccgttccagctcagcctcgccggccgcgtcatcaga
ggccgcatcgacgccgtctaccggcatggtgacggcgacgaggcgacgtacgagatcgtc
gactggaagaccaaccgcgcccacaccgccgacccgctccagctcgccgtgtaccggctg
gcctgggccgagcagcagggcataccccccgagtcggtcacggcctccttcctgtacgta
cgcagcggggaggtcgtacgccccgaagggctgccggaccgggacgcgctggagcggctg
ctcacgggtgagacggagagcacacgggaggcaagctga
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