Streptomyces sp. Go40/10: KBP30_17040
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Entry
KBP30_17040 CDS
T11184
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stgo Streptomyces sp. Go40/10
Pathway
stgo03420
Nucleotide excision repair
stgo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBP30_17040 (pcrA)
03430 Mismatch repair
KBP30_17040 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stgo03400
]
KBP30_17040 (pcrA)
Enzymes [BR:
stgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBP30_17040 (pcrA)
DNA repair and recombination proteins [BR:
stgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBP30_17040 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KBP30_17040 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UFR02784
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Position
complement(4109852..4112341)
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AA seq
829 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHEEEPPPPPEDDHAPEPVPDDLFGGKFDVPPDRDAYYRDGAP
RPVLDPAALLEGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLAERNVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTGERSAEDADTPTGEYDVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTIL
LEQNYRSTQTILSAANAVIERNESRRPKNLWTNAGQGARITGYVADTEHDEAQFVADEID
RLVDAGDARAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRV
LANPEDSVPLRRILNVPKRGIGERAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNA
VKRFNTLMEDLRTIVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVA
LEFEQERGEGEAGTLADFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEFPVVFLT
GMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSAMRSAWGQPSYNPPSRFL
EEIPPTHVEWKRTGAAAPVSSGPASGIAASLSSTRSRSSASGASGFATRRTAEKPVVALA
VGDRVTHDQFGLGTVVGVKGTGANAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccctcgcgggcacgag
gaggagcccccgccgccgcccgaggacgatcacgctccggagccggttccggacgatctg
ttcggtgggaagttcgacgtgccaccggaccgggacgcctactaccgtgacggcgccccc
cgccccgtgctcgacccggcggcactcctggaggggctgaacgagaaccagcgtgccgcg
gtcgtgcacgccggctccccgctgctcatcgtcgccggcgccggctccggcaagacccgc
gtgctgacccaccgcatcgcgtacctgctcgcggagcggaacgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcgcatc
ctgcgccgggagtccaagaagctcggcttcacctcgtccttctcgatctacgacgccgcc
gacagcaagcgcctgatggccctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgcccaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgccctg
taccagtcgcggctgcgcgaggcgaacgcgctggacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtggacgagtaccaggacacgaaccacgcccagtacgcgctcgtgcgggaactc
gtaggcaccggcgaacgctccgcggaagacgcggacaccccgaccggcgagtacgacgtc
ccgcccgccgaactctgcgtcgtgggtgacgcggaccagtcgatctacgccttccggggc
gcgacgatccgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctg
ctggagcagaactaccgctccacgcagaccatcctgtccgccgccaacgcggtcatcgag
cgcaacgagtcccgccgcccgaagaacctgtggaccaacgccggccagggcgcccgcatc
accgggtacgtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagac
cgcctggtcgacgcgggcgacgcgcgcgcgggggacgtcgccgtcttctaccgcaccaac
gcccagtcccgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtc
ggcggggtccgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtc
ctcgccaaccccgaggactcggtgccgctgcgccgcatcctcaacgtgcccaagcggggc
atcggcgagcgcgcggaggcgatgatcgacgccctctcccagcgggagaagatcagcttc
ccgcaggccctgaagcgggtggacgaggcgtacggcatggccgcgcgctccaccaacgcg
gtcaagcggttcaacacgctgatggaggacctgcgcaccatcgtggagtccggtgcggga
ccggccaccgtcctggaggcgatcctcgaacggaccggctacctggccgagttgcaggcc
tccaccgacccgcaggacgagacccggatcgagaacctccaggaactcgccgccgtcgcc
ctggagttcgagcaggagcgcggcgaaggcgaggccggcacgctcgccgacttcctggag
caggtcgccctggtcgccgactccgaccagatccccgacgaggaggacggcgacggcgtc
atcaccctgatgaccctgcacaccgcgaagggcctggagttcccggtcgtgttcctgacc
ggcatggaggacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctggag
gaggagcggcgcctggcctacgtcggcatcacgcgcgcgcgggagcggctgtacctcacg
cggtcggcgatgcgcagcgcctggggccagccgtcgtacaacccgccctcccgcttcctg
gaggagatcccgcccacccacgtggagtggaagcggacgggggcggcggcgccggtgtcc
tccgggccggcgtccgggatcgcggcctcgctgtcctcgacgcgctcgcgctcctcggcg
tccggcgcgtccgggttcgccacgcggcgcacggcggagaagccggtggtcgcgctggcc
gtcggtgaccgggtcacccacgaccagttcgggctcggcacggtcgtcggggtgaagggc
acgggcgccaacgcggaggccacgatcgacttcggcgacaccaagccgaagcggctgctg
ctgcggtacgcgccggtggagaagctgtag
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