Streptomyces sp. Go40/10: KBP30_20210
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Entry
KBP30_20210 CDS
T11184
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stgo Streptomyces sp. Go40/10
Brite
KEGG Orthology (KO) [BR:
stgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stgo03021
]
KBP30_20210
Transcription machinery [BR:
stgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KBP30_20210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
NirdL-like_HTH
HTH_3
MarR
DUF134
DUF4423
DUF7343
HTH_Tnp_4
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UFR07429
LinkDB
All DBs
Position
4765365..4766201
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AA seq
278 aa
AA seq
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MTVSASTAPPQEEAPTPTPPAPEKRRGADTRALTQVLFAELKELTPGTPEHNRVRGALIE
ANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKR
YFRDNVRTVHVPRRLHELWVQVNSATEDLTTLYGRSPSTAEIADRLRISEDEVLSCIEAG
RSYHATSLEAAQEGDGLPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPEREQRILLLRYY
SNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtgtcggccagtactgcgccgccccaggaagaggcgcccactccgaccccgccg
gcccccgagaagcgccgcggcgccgacacccgggccctgacccaggtgctcttcgccgag
ctgaaggaactcacccccggcacgccggagcacaaccgggtgcggggagcgctgatcgag
gcgaacctcccgctcgtgcgctacgccgccgcccgcttccgctcccgcaacgagccgatg
gaggacgtcgtccaggtcggcaccatcggcctgatcaacgccatcgaccgcttcgacccg
gaccggggcgtgcagttcccgaccttcgcgatgcccaccgtggtcggcgagatcaagcgg
tacttccgggacaacgtccgcaccgtccacgtcccgcgccggctgcacgagctgtgggtg
caggtcaacagcgcgaccgaggacctgaccacgctctacggccgctccccgtccaccgcc
gagatcgccgaccggctccggatcagcgaggacgaggtgctcagctgcatcgaggcggga
cggtcgtaccacgccacctcgctggaggccgcccaggagggcgacgggctgcccggcctg
ctggaccggatcggctacgaggacccggcactggacggcgtggaacaccgcgacctggtc
cgccacctcctcgtccagctccccgagagagaacagcgaatccttcttctgcgctactac
agcaatctcacccagtcacagatcagcgcggaactcggcgtctcccagatgcatgtctca
cggctgctcgcccgtagcttccaacggctgcgttccgcaaatcggatcgacgcatag
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