Symbiobacterium thermophilum: STH1275
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Entry
STH1275 CDS
T00196
Name
(GenBank) NifA family transcriptional regulator
Organism
sth
Symbiobacterium thermophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA
EIIA-man
AAA_5
AAA_16
Mg_chelatase
AAA_22
TrmB
Sigma54_activ_2
RuvB_N
AAA_14
AAA_29
AAA_2
HTH_IclR
NACHT
HTH_20
MarR_2
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAD40260
UniProt:
Q67PY3
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All DBs
Position
1412575..1415325
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AA seq
916 aa
AA seq
DB search
MTTLKFHPILEESCPQSRRGWPRVRKDRVLEALRQLAPAGSSSGVTAMEVAEHVGIRRNN
ASADLNELVNEGLALKLKGKPVRFIAAAEPGSPAVPAPVANDPFDELVGYGGSLGAAVEQ
AKAAMLYPPRGLPTLISGPTGSGKSRLAEAMYRYAVAAGRLPPGAPFCVFNCADYAANPQ
LLQAQLFGYVKGAFTGAERDTPGLVAQADGGLLFLDEIHRLPPDGQEMLFLLMDRGVYRA
LGDTATRQASVMLVGATSEDPSSSLLNTFVRRFPVVIHLPGLDVRPVEERLALIEVFLRE
EASRIGKAIVVSPLVLLALLAYRTTGNVGELRSAILMACAKAFFAHAAAGLGDGAPISLD
LTHLSPQIQLAYLQAHESSGDAERLVGVEDRVYRPSTLRSQVRYVDDYVPADLYAQLHRR
VTGYLRAGLQESELRRVIRTDLDYYLRRLLHRADRAGVVSNRLLEIVTGFVREVGDELNE
NFGSEVVTGLALHLAARSDHDLDVDQALALVAQCPAEYAAVNRLAPRLEAELGVRLLPGE
KSFLALFLAAHRPRNAPSGLQVMVIAHGDSTASSMAAVANELLGTDIVTAVDMPLEQSVQ
ATVELAAARVRAFGPVRGVVLLVDMGSLTGLGPALERETSVPFAVVPLVTTPAVIEAARV
AQEPGSDLATVVRAVRRVYTGQEEEPVVAAGKRLVITTCLTGQGTARKLAAFLTEALPPD
LRESVAVQAVDLDNGSVLPGLLVEGWRKGVVAVVGTIDPRLPGVPFIGLERVLFGDGLQA
LADLLRGEEAPAAAPSATREEAMELSMRFLVDNIASVDGRRAGEAAAGALRRFEESLGMR
LNANRVARWIIHLGFAIERLASDGTTYPCPEEEYLRARHGSLLSAIADALEPVGRSWGFS
FPSGEVAYMALIVLTE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccttaaagtttcaccctatactggaggaaagctgtccgcaatcgcgaaggggg
tggccccgcgtgcgcaaggatcgggtcctggaggcgcttcgtcagcttgcaccggccgga
agctccagcggtgtgacggccatggaggtggccgaacacgtcggcatccggcggaacaac
gccagcgccgatctcaacgaactggtcaacgaagggctcgcgctgaaactgaaggggaag
cccgttcggttcatcgccgcggcagagcccgggtcgcccgccgttcccgctccggtggcc
aacgatcccttcgacgagctggtcgggtacggcgggagcctcggcgccgcggtggagcag
gccaaggcggccatgctctatcccccgcgcgggttgccgacgctcatctccggccccacc
gggtcgggcaagagccggctggcggaggcgatgtaccggtacgccgtggccgcggggcgg
ctccccccgggagcgcccttctgcgtgttcaactgcgcggactacgccgcgaacccgcag
ctgctgcaggcccagctcttcggttacgtgaagggcgccttcaccggggcggaacgggac
acgccggggctcgtggcgcaggcggacgggggcctgctgttcctggacgagatccaccgc
ctgccccccgacggccaggagatgctcttcctgctgatggaccggggcgtctaccgcgcc
ctgggcgacacggccacccggcaggcgtcggtgatgctggtgggcgcgacgtccgaggac
ccgagttcttcgctcctgaacacctttgtccgccggttcccggtggtcatccatctgccc
gggctggacgtccggccggtggaggagcggctggcgctcatcgaggtcttcctgcgggag
gaggcttcccgcatcggcaaggccatcgtcgtaagcccgctggtcctgctggcgctcctg
gcctaccgcaccaccgggaacgtgggagagctgcgcagcgccatcctcatggcgtgcgcc
aaggcgttcttcgcgcacgcggcggccgggttgggcgacggcgccccgatttccctcgac
ctcacccacctgtccccccagatccagctggcctacctgcaggcccatgaatcgtcaggc
gacgcggagcggctcgtcggcgtcgaggaccgggtctaccggccgtccaccctgcgcagt
caggtgcggtacgtcgacgactacgtgcccgcggacctctacgcgcagctgcaccgccgg
gtgacggggtatctgcgggccggcctgcaggaaagcgagctccggcgggtcatccggacc
gacctggactattacctgcgccggctgctgcaccgcgcggaccgcgcgggcgtggtctcc
aaccggctcctggagatcgtcaccgggttcgtccgggaggtcggcgacgagctgaacgag
aacttcggttccgaggtggtgaccggcctcgccctccacctggcggctcggtcggaccac
gacctggacgtcgaccaggcgctggcgctggtcgcccagtgcccggccgagtacgccgcg
gtcaaccggctggccccccggctcgaggcggagctgggcgtgcggctgctccccggcgag
aagagcttcctggcgcttttcctggccgcgcaccggccccgcaacgccccctcggggctg
caggtgatggtgattgcccacggcgacagcaccgcgtccagcatggcggccgtggccaac
gaactgctgggcacggacatcgtcacggccgtcgacatgccgctggagcagagcgtgcag
gcgacggtggagctggcggcggcgcgcgtgcgggcgttcggccccgtgcgcggcgtggtg
ctgctggtcgacatgggctcgctgaccgggctggggccggccctggagcgggagaccagc
gtgcccttcgcggtggtcccgctggtgacgacgccagccgtgatcgaggccgcccgggtc
gcacaggagccgggcagcgaccttgcgaccgtggtgcgcgcggtgcgccgcgtctacacc
ggccaggaggaagagccggtggtggccgcaggcaagcgcctcgtcatcaccacgtgtctc
acggggcaggggacggcccgcaagctggcggccttcctgacggaggccctgccgccggac
ctgcgggagtcggtggccgtccaggcggtggacctggacaacgggtcggtcctccccggc
ctcctggtggagggatggcgcaagggggtcgtcgcggtggtgggcaccatcgacccgcgc
ctgccgggcgtgccgttcattggcctggagcgggtcctgttcggcgacggcctgcaggcc
ctggccgacctcctgcggggggaggaggcgccggccgccgccccgtcggccacccgcgag
gaggccatggagctctccatgcgcttcctggtggacaacatcgcctccgtggacgggagg
cgggccggggaggcggccgcgggcgcgctgcgccgcttcgaggagagcctggggatgcgg
ctgaacgccaaccgggtggcccggtggatcatccacctcgggtttgccatcgagcggctc
gccagcgacgggaccacctacccctgcccggaagaggagtatctcagggcccggcacggg
tcgctgctctcggccatcgcggacgccctggagcccgtcggacgcagctggggcttctcc
ttcccgtccggcgaggtggcctacatggcgctgattgtcttgacggagtag
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