Symbiobacterium thermophilum: STH13
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Entry
STH13 CDS
T00196
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03030
DNA replication
sth03430
Mismatch repair
sth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STH13
03430 Mismatch repair
STH13
03440 Homologous recombination
STH13
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sth03032
]
STH13
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH13
Enzymes [BR:
sth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STH13
DNA replication proteins [BR:
sth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STH13
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STH13
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
AAA_5
AAA_22
AAA_19
AAA_14
RCF1-5-like_lid
TIP49
AAA_assoc_2
Mg_chelatase
AAA_24
AAA_18
Rad17
nSTAND3
AAA_28
AAA_16
AAA_7
TsaE
ORC-CDC6-like
DUF815
AAA_2
AAA_25
Cytidylate_kin
ABC_tran
MgsA_C
Zeta_toxin
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BAD38998
UniProt:
Q67TJ5
LinkDB
All DBs
Position
16249..17961
Genome browser
AA seq
570 aa
AA seq
DB search
MAHLALYREYRPQRFGEVVGQEHITRTLRNAIVQGRLHHAYLLSGPRGTGKTTVARILAK
AVNCLNPQDGEPCNECEACRRITSGEALDLIEIDAASNRGIDEIRDLRDKVNFAPVELKY
KVYIIDEVHMLTEPAFNALLKTLEEPPAHVLFVLATTEKQKLPITILSRCQAFDYRRLSA
DEIVARLREVCGKQGLKASPEALAAIARHADGGMRDALSLLDQVMAYAAEGEITLDMTLA
VLGTAPLDQFLALDGHLLRGDVGAALLWLDEMVRAGKDLRQLVRDYLAHLRDLLLVKLEA
GAQVLGLPAEALEQMRARAEPFAERQLIRAIRLLGQAETELRLSPSPRLLVEVALIRLTG
LFTGAAADEGEDDGTAAEAAAPSRRRRQEHGEVRPQGASQATAPGPAGPGDPGEPAGGQA
TTPSAPAPVGAGVDRVVEAWEQVLGLVRKARTSTYHLLSTTARIGGLRGNRLFLVANSQV
FAQLLRRPEDKRIIEKALERAGLSGLQVEILAADEAQGKLAGLAPAAPGAEEKPAAERPD
AAAEGDGPLMERLRSIFPPDLIHEEDEEGS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
ttggcccaccttgcactgtatcgcgagtaccggcctcaacggttcggcgaagtggtcgga
caggagcatatcacccgcaccctgcgcaacgcgatcgtgcagggcaggctccaccatgcc
tatctgctgtccggcccgcgcggcacgggcaagaccacggtcgcccgcatcctggccaag
gcggtcaactgcctgaacccgcaggacggtgagccctgcaacgagtgcgaggcctgccgg
cgcatcacgtcgggcgaggcgcttgacctgatcgagatcgacgcggcctccaaccgcggc
atcgacgagatccgcgacctgcgggacaaggtcaactttgccccggttgagctgaagtac
aaggtgtatatcatcgacgaggtgcacatgctgaccgagccggccttcaacgcgctgctg
aagacgctggaggagcccccggcgcatgtgctcttcgtgctggcgaccaccgagaagcag
aagctgcccatcaccatcctctcccgctgccaggccttcgactaccggcggctgtccgcg
gacgagatcgtggcacggctgcgggaggtgtgcgggaagcagggactcaaggccagcccg
gaggccctggcggccattgcccgccacgccgacggcggcatgcgcgacgccctgtcgctg
ctggaccaggtgatggcctacgccgccgagggcgagatcaccctcgacatgaccctggcc
gtgctgggcacggccccgctggaccagttcctggccctggacggccacctgctccggggg
gacgtgggcgcggcgctgctctggctggacgagatggtgcgcgcgggcaaggacctgcgg
cagctggtgcgggactacctggcgcacctgcgcgacctgctgctggtcaagctggaggcc
ggcgcccaggtgctcggcctgcccgcggaggccctggagcagatgcgggcccgggccgag
ccgttcgcggagcggcagctcatccgggcgatccgactgctggggcaggcggagacggag
ctgcggctctccccgtccccgcgcctgctggtggaggtggccctgatccggctgaccggg
ctgtttaccggtgcggccgcggacgaaggagaggacgacggaaccgccgcggaggctgcc
gcgccttcccggcggcgccggcaggagcacggcgaggtccggccgcagggcgcttcgcag
gcgacggcgccgggccccgcgggcccgggcgacccgggcgaaccggccggcggccaggcg
acgaccccttccgccccggcgcccgtcggggccggcgtggaccgggtggtggaagcctgg
gagcaggtgctgggtctcgtccggaaggccagaaccagcacctatcacctgctctccacc
acggcgcgcatcgggggcctgcgcggtaaccggctgttcctggtggccaactcgcaggtc
ttcgcccagctcctccggcggccggaggacaagcggatcattgagaaggccctggagcgt
gcggggctgagcggcctgcaggtggagatcctcgccgcggacgaggcccaggggaagctc
gccgggctcgccccggcggcgcccggcgcggaggagaagcccgcggcggagcggccggat
gcggccgccgagggggacggtccgctcatggagcggttgcggagcatttttcccccagac
ctgattcacgaagaagatgaggagggctcctga
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