Symbiobacterium thermophilum: STH1481
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Entry
STH1481 CDS
T00196
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sth
Symbiobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sth03032
]
STH1481
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH1481
Enzymes [BR:
sth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
STH1481
DNA replication proteins [BR:
sth03032
]
Prokaryotic type
DNA Topoisomerases
STH1481
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STH1481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_GRF
Toprim_4
DUF2752
Motif
Other DBs
NCBI-ProteinID:
BAD40466
UniProt:
Q67PC7
LinkDB
All DBs
Position
1618572..1620779
Genome browser
AA seq
735 aa
AA seq
DB search
MPKSLIIVESPAKAKTIEKFLGRKYAVKASMGHVRDLPKSQLGVSVENDFEPKYITIRGK
GDILKELRESARKADRVYLATDPDREGEAISWHLAQVLKLPLDEPLRIEFHEITKDAIQR
AIKQPRPIDLNRVEAQQARRVLDRLVGYKLSPLLWRKVRRGLSAGRVQSVAVRLIVDRER
EIQAFQPEEYWTLDARLSTAFAQSFSARYWGMGEQKADLKTQDQVRAVVHQVAGDRLPAG
NAAVSGEGTPGDPFTEVLDLAGEGLVLQVRSVKRREKKRNPAYPFTTSSLQQEASRKLGF
SVRRTMAVAQQLYEGLPLGEEGHTGLVTYIRTDSTRIADEAARAAAEFIERQYGKDYVPE
RRREPDRRAGEQGAHEAIRPTDVTRTPESVKPYLTPDQYRLYRLIWERFLASQMAPAVLD
TVTVELVAGEHVFRASGQSIRFPGFMKVYIEGEDDDGQREEGDDLLPELAEGQQVTLQTL
EARQHFTQPPPRYSEAMLVKALEERGIGRPSTYAPIIGTIQTRGYVEKRDKRFYPTELGV
LVTDILKEYFPDIIDVEFTAHLEGKLDEVEEGRVNWRELIRRFYGPFEETLKQAEEKVGG
FELEDEVSDVPCEKCGRLMVVKHGRFGKFLACPGFPECKSTKPILEETGVTCPACGTGRI
VERKSKKGGRRFYGCTNYPDCNFVSWEKPVNRLCPECGAPYLVEKRIKELGLSHVCKQPD
CGYVEPVESMEEVHA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttgccgaagagcctgatcatcgtcgagtccccggccaaggcgaagaccattgagaagttc
ctcgggcggaagtacgccgtgaaggcctccatgggccacgtgcgcgacctgcccaagagc
cagctgggggtctcggtggagaacgacttcgaaccgaaatacatcacgatccgcggcaag
ggcgacatcctgaaggagctgcgggagagcgcgcgcaaggccgatcgggtctacctggcc
acagacccggaccgggagggtgaggcgatttcgtggcacctggcccaggtcctgaagctg
ccgctggacgagccgctgcgcatcgagttccacgagatcacgaaggatgccatccagcgg
gcgatcaagcagcccaggcccatcgacctgaaccgggtggaggcgcagcaggcgcgccgg
gtgctcgaccggctcgtggggtacaagctgagtccgctgctgtggcgcaaggtacggcgc
ggcctctccgcggggcgggtgcagtcggtggcggtgcggctgatcgtcgaccgcgagcgc
gagatccaggcgttccagccggaggagtactggaccctggacgccaggctgtcaacggcc
tttgcccagtccttcagcgcccggtactggggcatgggcgagcagaaggcggacctgaag
acgcaggatcaggtacgggcggtggtgcaccaggtggccggagaccggctgccggccggt
aacgccgcggtgagcggggagggcacgcccggcgatccgttcaccgaggtgctggacctc
gccggcgagggcctcgtcctgcaggtgcgcagcgtgaagcggcgcgagaagaagcggaac
cccgcgtaccccttcaccacgtccagcctgcagcaggaggcctcccgcaagttggggttc
agcgtgcggcgtacgatggcggtggcccagcaactctacgaggggctgccgctgggcgag
gaaggccacaccggcctggtgacctacatccgcaccgactccacccggatcgccgacgaa
gccgcccgggcggcggcggagttcatcgagcggcagtacgggaaagactacgtcccggag
cggcggcgtgagccggaccggcgcgccggcgaacagggagcccacgaggccatccgcccg
acggacgtcacccggacgccggagtcggtgaagccgtacctcacgccggaccaataccgg
ctctaccggctgatctgggagcgcttcctggcgagccagatggctcccgccgtgctcgac
acggtcacggtggagctggtagcgggggagcacgtgttccgggccagcgggcagagcatc
cgtttcccggggttcatgaaggtctacatcgagggcgaggacgacgacggccagcgggag
gagggcgacgatctgctgcccgagctggccgaggggcagcaggtcaccctgcagacgctg
gaggcgcggcagcactttacgcagccgccgccccggtactccgaggccatgctggtcaag
gccctggaggagcgggggatcggccggccgtccacgtacgcgcccatcatcggaaccatt
cagacccgcggctacgtcgaaaagcgggataagcgtttctatcccacggagctcggcgtg
ctggtcacggacatcctgaaggagtacttcccggacatcatcgacgtcgagttcaccgcc
cacctggaaggtaagctggacgaggtggaggaggggcgggtgaactggcgggagctgatc
cggcggttctacggccccttcgaggagacgctgaagcaagccgaggagaaggtgggcggg
ttcgagctggaggacgaggtctccgacgtgccctgcgagaagtgcggccggctgatggtc
gtgaagcacggccggttcggcaagttcctggcctgcccgggcttccccgagtgcaagtcc
accaagccgatcctggaggagacgggcgtcacctgcccggcctgcggcaccggccgcatc
gtggagcggaagtccaagaagggcggcaggcggttctacggctgcaccaactaccccgac
tgcaacttcgtgtcgtgggagaagcccgtgaaccggctctgcccggagtgcggcgccccc
tacctggtcgagaagcggatcaaggagctgggcctcagccacgtctgcaagcagccggac
tgcgggtacgtggaaccggtggagagcatggaagaggtgcatgcctga
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