Symbiobacterium thermophilum: STH2173
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Entry
STH2173 CDS
T00196
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sth
Symbiobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH2173
Enzymes [BR:
sth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STH2173
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
STH2173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_22
AAA_30
AAA_12
DUF2059
Motif
Other DBs
NCBI-ProteinID:
BAD41158
UniProt:
Q67MD5
LinkDB
All DBs
Position
complement(2317255..2321370)
Genome browser
AA seq
1371 aa
AA seq
DB search
MRAMSDVRWTPEQEQAITARGADVLVAAAAGSGKTAVLVERIIRRLVDERDPLDVDQLLV
VTFTEAAATEMRDRIGAALQAALAGNPENERLQRQLALLGRASISTLHSFCLSLVRQYFY
RLGLDPAVSVMGEHEALLLRHEVLDQLFARRFDEEEDGPFHALVDRYGGGRDDEGLRNLV
LAIYDHMQALPWPDQWLEESLARFDVPEGAAIEDLPWWPPLRRQIRLELELAAEALASAR
ALAARPGGPAAYLDVLAAEEAAVRAAAARTETGSYADLAEAVAAVAFGRLPGTKKGEVDE
GLKEAVGKLRERAKKAVRAVQEQWFCRTADEWLADLQAIAPHLRTLGGVVREFAEAFREA
KAAQSAIDFNDLERLALQLLRDSTSTPDRLVPSDVARDLRARYREILVDEYQDINGVQDA
ILTLVARDGQEGPPNRFMVGDVKQSIYRFRHADPGLFLAKYGAYRPWAGAPEPGAAGARI
VLGANFRSREGVVNAVNFLFRQIMSARAGELDYDRDAELVYRAGYPPLPGEEAAEPPVEL
HLLDGEEQGPADGAGSGQAPAASGPEAASGDGVAGEADGEEEDPALAELADLTAMEREAR
LIAARIRAMVDGTADQPPVQVWDRKLKTYRPLQYRDIAILLRATTGRINTIIEVLSQSGI
PAYGQVSTGYFQATEVQVFLSLLQVLDNPLQDIPLAAVLHSPIVGLSAADLARIRLANPR
GSFYDALVAAAAPASGAAMAEAAAAPASEAAMAEAAPAPASGAAMAEAAAAADPAEAGAT
TSTAPGLEGVLVRFLECLDRWRTLARRRPLSQVVWQILQETGYLHYVGGMPGGAQRQANL
LALYERAREFDQFARQGLFRFLRFIERLQAEQSDMGTAPALGEGEDVVRIMSIHKSKGLE
FPVVFVAGLGSSFSDRDLRGDLLLNRDLGFGPQVVDPGTRLKYPTLAYHAVREVTRLANL
AEELRVLYVALTRARERLVLVGSVKSLRAACARWSRGAGAPGWPLPESLLLSARSYLDWI
GPAVLRHADGAPLRELAGEGGTAPGSGPDPALAGDPSRWEVTIWDPASLQQILQPRPEAA
PPAVDWARIGAAEPLDRPLDEALHARLRARFGWRYPFEPVVRRFGKLSVTELKGYFDPDA
EAPAEEMAPPAEEMAPPAEEMAPPAEGSAPPVEEPAPSTEPSSSTFAARPRFLQQDRRAL
SPTERGTAVHVVMQHLDLSRPLDAEGVGRQLAEMVERELLTPQQAAAVDAEAIADFFASP
LGLRILQSRDRVSQELSFTLAVPAAEVYGDLPPEAAAGDVVIVQGMIDLLLEEEDGYVLV
DYKTDRRDPVQAAQRYTTQIRFYRRAVEEILGRPVKEAYLHFLASRRSIAV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
gtgagggcgatgtctgacgtgcgctggacgcccgagcaggagcaggcgatcaccgcccgg
ggtgcggacgtcctggtggcggccgcggccgggtcgggcaagaccgccgtcctggtggag
cggatcatccggcggctggtggacgagcgggacccgctggacgtggaccaactgctggtg
gtgaccttcaccgaggcggccgcgacggagatgcgggaccggatcggcgccgcgctgcag
gccgccctcgcagggaatccggagaacgagcggctgcagcggcagctggcgctgctgggc
cgggcgtccatcagcaccctgcacagcttctgcctcagcctcgtgcgccagtacttctac
cggctggggctggaccccgcggtttcggtgatgggggagcacgaggccctgctcctgcgc
catgaggtgctggaccagctcttcgcccgccggttcgacgaggaggaggacgggcccttc
cacgccctggtggaccgctacggcgggggccgggacgacgaggggctgcggaacttggtg
ctggccatctatgaccacatgcaggccctgccgtggcctgaccagtggctggaggagagt
ctggcccggttcgacgtgccggaaggcgcggccatcgaggacctgccgtggtggccgccg
ctccggcggcagatccggctggagctggagctcgcggctgaagccctggcctccgcccgg
gcgctggccgcccgtcctggcggtcctgcagcctacctcgacgtgctggcggcggaggag
gcggcggtccgggcggctgccgcgcggaccgagaccggatcctacgccgacctggcggag
gcggtggccgcggtggccttcggccggctgcccgggaccaagaagggcgaggtggacgaa
gggctgaaggaggcggtggggaagctgcgggagcgggccaagaaggccgtgcgcgcggtg
caggagcagtggttctgccgcaccgccgacgagtggctggcggacctgcaggccatcgcc
ccccacctacgcaccctgggcggtgtggtgcgggagttcgccgaggccttccgggaggcc
aaggccgctcagtccgccatcgacttcaacgacctggagcggctcgccctgcagctcctc
cgagactcgacctccacgcccgaccggctcgttccctcggatgtggcccgggacctccgg
gcccgctaccgggagatcctggtggacgagtaccaggacatcaacggcgtgcaggacgcg
atcctgaccctggtcgcccgggacgggcaggagggcccgcccaaccggttcatggtgggc
gacgtgaagcagtccatctaccggttccggcacgcggaccccggcctgttcctggccaag
tacggcgcgtaccggccctgggccggcgcgcccgaacccggcgcggccggcgcccgcatc
gtgctgggggccaacttccgcagccgggagggcgtggtgaacgccgtcaacttcctcttc
cggcagatcatgagcgcacgggcgggcgagctggactacgaccgggacgccgagctggtg
taccgggccggctatccgcccctgcccggggaggaggcggcggagccaccggtggagctg
cacctcctggacggggaggagcaggggcccgcggacggcgccggatcgggccaggccccg
gctgcatccggccccgaggcggcgtcgggggacggcgtcgccggcgaggccgacggcgag
gaggaagacccggcgctggccgagctggccgacctgacggccatggagcgggaggcccgg
cttatcgccgcccgcatccgggcgatggtggacggcaccgccgaccagccgcccgtgcag
gtctgggaccggaagctgaagacctaccggcccctgcagtaccgggacatcgccatcctg
ctccgggccacgaccgggcggatcaacacgatcatcgaggtgctgagccagtccgggatc
cccgcttacggccaggtatcgaccggctacttccaggccaccgaggtgcaggtgttcctg
agcctcctgcaggtgctggacaaccccctgcaggacatcccgctggcggcggtcctgcac
tcgcccatcgtcggcctctccgccgccgaccttgcccgcatccggctggcgaacccccgg
ggctccttctacgacgccctggtcgcggcggcggcgcccgcgagcggggcggcgatggcg
gaggcggccgcggcgcccgcgagcgaggcggcgatggcggaggcggccccggcgcccgcg
agcggggcggcgatggccgaggcggccgcggcggcggacccggcggaggccggagcgacg
acgtcgacggcgccggggctggagggcgtcctcgttcggttcctggagtgtttggaccgc
tggcgcaccctggcccgccgcaggcccctcagccaggtggtctggcagatcctgcaggag
accggctatctgcactacgtgggcggcatgcccggcggagcgcagcggcaggccaacctg
ctggccctgtacgagcgggcccgggagtttgaccagttcgcccgccaggggctgttccgg
ttcctgcgcttcatcgagcggctgcaggcggaacagtccgacatgggcaccgcccccgcg
ctgggcgagggcgaggacgtggtccgcatcatgtccatccacaagagcaaggggctcgag
ttcccggtggtcttcgtggccggcctgggcagttcgttctccgaccgggacctgcgcggc
gacctgctcctcaaccgggacctgggattcggcccgcaggtggtggaccccgggacgcgg
ctgaagtacccgaccctggcctaccatgcggtgcgggaggtcacgcggctggccaatctg
gcggaggaactgcgggtgctgtacgtggccctgacccgggcccgggagcggctggtgctg
gtcggcagcgtgaagagcctgcgggcggcgtgtgcgcgctggtcccgcggggccggagcg
ccgggctggcccctgcccgagtcgctgctgctctccgcccggagctatctggactggatc
ggcccggcggtgctgcgccacgcggacggcgccccgctcagggaactggcgggcgagggc
gggacggcccccgggagcggcccggatcccgccttggcgggcgatccctcccgctgggag
gtgacgatctgggatcccgcgtcgctgcagcagattctgcagccgcggcctgaggcagcc
ccgccggcggtggactgggcccgcatcggcgcggccgagcccctcgaccggcccctggac
gaggccctccacgcacggctgcgggcgcgcttcggctggcgctatcccttcgagccggtg
gtacgccgcttcggcaagctgtcggtgacggagctgaagggctacttcgatccggatgcc
gaggcgccggccgaggagatggcgccgccggccgaggagatggcgccgccggccgaggag
atggcgccgccggccgaggggtctgcgccgccggttgaggaaccggcgccgtccacggag
ccgtcatccagcaccttcgcggcccggccccggttcctgcagcaggaccgccgcgcgctc
tcgcccaccgagcggggtaccgcggtgcacgtggtgatgcagcacctggatctcagccgc
ccgctggacgcggagggggtggggcgccaactggcggagatggtggagcgggagctgctc
acaccgcagcaggcggcggcggtggacgcggaggcgatcgcggatttcttcgcctcgccc
ctgggcctgcggatccttcagtcccgggaccgggtcagccaggagctctccttcacgctg
gccgttcccgcggcggaggtctacggcgacctgcccccggaggcggccgccggcgacgtg
gtcatcgtgcaggggatgatcgacctgctgctggaggaggaggacggatacgtcctggtg
gactacaagaccgaccggcgcgaccccgtgcaggcggcacagcgctacaccacccagatc
cgcttctaccggcgggccgtggaggagatcctgggccggcccgtgaaggaggcctacctg
cacttcctggccagccgcagatcgatcgccgtgtga
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integrated database retrieval system
