Symbiobacterium thermophilum: STH2174
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Entry
STH2174 CDS
T00196
Name
(GenBank) ATP-dependent deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sth
Symbiobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH2174
Enzymes [BR:
sth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STH2174
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
STH2174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Fas1-AflB-like_hel
Motif
Other DBs
NCBI-ProteinID:
BAD41159
UniProt:
Q67MD4
LinkDB
All DBs
Position
complement(2321354..2324851)
Genome browser
AA seq
1165 aa
AA seq
DB search
MRFIIGGAGSGKSQRCLDELTQAAQAAPAGPPLILLVPEQATFQVEQALLGSGRLKGIIR
AQVLSFQRLAWRVSLKAGGLALPPLSDLGKQMVLRALLEKKRDDLRLFHQVADKPGFIER
VAGSIRELRSYRQGPESLRRQLSQLEAEGLGETSLGAKLHDLALVMDELRSYIEGRFTDP
DEYLTVLAARLEESRLLEGAEVWVDGFNGFTPQELAVLGAVMRSARQVHISLCIPPGQLY
KAGGHHSPSDLFHPVLSTYDQLMQLAAESGVAVDPPLYLNEPLRFRGAPELAHVERYLFR
QSAPAWPGAPERIALVEAQNRREEVAAAAREILRLVREEGLRFREIAVVARDLEGYGDLA
ATLFAEHGIPAFIDRRRTVAHHPLVELLRAALEVVVQDWAYGPVFRYLKTDLTGVSRAEI
DLLENYVIEHGIRGRAWQQQEPWQYLRRYTLEEDAVPAGPAQQALLDEIHRIRRRATAPL
LAFQRRLQRRGRPGPTVREITTYLFQLLDDLKVARQLEAWKAEAEQRGDLETAREHEQVW
TRVLELFDQIVEGLGDQVLSPKVYLQVLSAGLDGLKLGLIPPGLDQVIVGTVERSRHAGV
RATLILGATEKDFPPQPAEDAIFTDRERERLKQSGLDVGPTSLERLFQEQFLTYVALTRG
SDFLWISYPLADESGRAAAPSPVVGRMRRLFPELKPRPAAPPAPDAEAAVAQVATPRQLA
AAVARALRRARSGYAVEPHWLDLYQCIVLDPDLHREGAAVLAAVGYEEWLRRRGTPVGRE
LARLLYGDRLVTSVSRLEAFLSCPFRHFAGYALRLQGRAEFTVSAPEFGLFYHAALSLFV
RELERDGLAWDTLTPDEAWRRMDSIIDRLAPRLQSEILLSSPQHRYLLRVIRRTLQSSLD
YLSEHVLHGEFRPVAVEVPFGEEMDGLPPVEVDLPGGGRVLLRGRIDRVDALEGRDGRWY
VRVIDYKSGRRDLRLGDFYHGLTLQLLLYLMAVVEGGEPLLPGTRVPAGALYLPVYDPVE
PVNAPVPPDEVRPLRRKRYQARGLVSDDPAVIQAMDAAGLGLIQAKLKKDGTVYKGAPVA
SPDQFRQLFAHLRRVVRACGEQILQGEAAIAPYRLGPHTACQYCAYRPVCQFDPAVEPQG
YRRLEKMDAPDVWQRVAAAGGEGDV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttcatcatcggcggcgccggctcgggcaagagccagcgctgcctggacgagctg
acccaggccgcgcaggcggcacccgccggcccgccgctcatcctgctggtgcccgaacag
gccaccttccaggtggagcaggcgctgctggggagcgggcggctgaagggcatcatccgg
gcgcaggtgctgtcgtttcagcggctggcctggcgagtctccctgaaggccggcggcctt
gcgctgccgccgctcagcgacctgggcaagcagatggtgctgcgcgcgctgctggagaag
aagcgggatgacctccgcctcttccatcaggtggcggacaagcccggcttcatcgagcgg
gtggcgggctccatccgggagctgcgcagttaccggcagggaccggagagcctgcggcgg
cagctgtcgcagctggaggccgaagggctgggcgagaccagcctgggggccaagctgcac
gacctggccctggtgatggacgagctgcgtagttatatcgaaggaaggttcacggatccc
gacgagtacctgaccgtcctcgcggcccggctggaggagagccggctgctggagggggcc
gaggtctgggtggatggcttcaacggcttcacgccgcaggagctggcggtgctcggggcc
gtcatgcggtcggcgcgccaggtgcacatcagcctctgcatcccgcccggccagctctac
aaggccgggggccaccactcgccgtcggacctcttccacccggtgctttcgacctacgac
cagctgatgcagctggcggcagagagcggcgtcgccgtggacccgcccctgtacctgaac
gagccgctccggttccgcggcgcccccgaactggcccatgtcgagcggtacctgttccgc
cagtccgccccggcctggcccggcgcccccgagcgcatcgccctggtggaggcgcagaac
cggcgggaggaggtggccgcggcggcccgggagatcctgcggctggtgcgggaggagggg
ctgcgcttccgggagatcgccgtcgtcgcccgggatctggagggctacggcgaccttgcg
gccaccctcttcgccgagcacggcatcccggcgttcatcgaccggcggcgcaccgtggcg
caccacccgctggtggagctcctgcgagcggcgctggaggtggtggtgcaggactgggcc
tacggccccgtcttccggtacctgaagaccgacctgaccggcgtctcccgcgccgagatc
gacctcctggagaactacgtgatcgagcacggcatccgcggccgggcctggcagcagcag
gagccctggcagtacctgcgccgctacacgctggaggaggacgccgtcccggccgggccg
gcccagcaggcgctgctggacgagattcaccgcatccgccgccgggcgacggcgccgctc
ctggccttccagcggcgcctccagcgccggggacggccggggcccacggtgcgggagatc
accacctacctgttccagctcctggacgacctgaaggttgcccggcagctggaggcgtgg
aaggcggaggctgaacagcggggcgacctggagacggcccgggagcacgagcaggtctgg
acccgggtgctggagctgttcgaccagatcgtcgaggggctgggggaccaggtcctgagc
cccaaggtctacctgcaggtgctgagcgccggcctggacgggctgaagctgggactcatc
ccgcccgggctggaccaggtcatcgtcggcacggtggagcggagccgccacgccggcgtg
cgggccaccctgatcctcggcgccacggagaaggacttcccgccccagcccgccgaagac
gcgatcttcaccgaccgggagcgggagcggctgaagcagtcggggctggacgtgggcccc
accagcctggagcggctcttccaggagcagttcctcacctacgtggcgctcacccgcggc
tccgacttcctctggatcagctaccccctggccgacgagtccggccgggccgcggcgccc
tcgccggtggtcggccggatgcgccggctcttccccgaactgaagccccgtccggccgcg
ccgccggcgccggatgccgaggctgccgtggcgcaggtggccaccccccggcagctggcg
gctgcggtggcccgggcgctgcgccgggcccggtctgggtacgctgtcgagccccactgg
ctggacctctaccagtgcatcgtcctggaccccgacctgcaccgggagggcgcggcggtc
ctggccgcggtgggctacgaggagtggctgcgccgccggggcacgccggtggggcgggag
ctggcccggctgctctacggcgaccggctggtgaccagcgtcagccggctggaggcgttc
ctgtcctgcccgttccgccacttcgcgggctacgccctgcgactgcaggggcgggccgag
ttcaccgtcagcgcacccgagttcggcctcttctaccacgccgcgctctccctgttcgtg
cgggaactggaacgggacgggcttgcgtgggacacgctgacccctgacgaggcctggcgg
cggatggacagcatcatcgaccggctggcgccgaggctgcagagcgagatcctgctgtcc
agcccgcagcaccggtacctgctccgggtcatccgtcggaccctgcagtcctcgttggac
tacctcagcgagcacgtgctccacggggagttccggccggtggccgtggaggtgcccttc
ggtgaggagatggacggcctgccgccggtggaggtggacctgccgggcggagggcgggtg
ctgctgcggggccgcatcgaccgggtggatgccctggaggggcgcgacggccgctggtac
gtgcgggtcatcgactacaagtccggccggcgggacctgcggctgggcgacttctaccac
ggcctgaccctgcagctcctgctctacctgatggctgtggtggaggggggcgagccgctg
ctgcccgggacgcgggtgcccgccggggcgctctacctgccggtctacgacccggtcgag
ccggtgaacgcccctgtcccgccggacgaggtgcgcccgctgcggcggaagcggtatcag
gcccgggggctggtgagcgacgacccggccgtcatccaggccatggacgccgccggactg
gggctcatccaggcgaagctgaagaaggacggtaccgtgtacaagggcgcgccggtggcc
agcccggaccagttccggcagctgttcgcgcacctgcggcgggtggtgcgggcctgcggc
gagcagatcctgcagggcgaggcggcgatcgccccgtaccggctcggcccgcacacggcc
tgtcagtactgcgcctaccgcccggtctgccagttcgatccggcggtggagccccaagga
taccggcggctggagaagatggacgcccccgacgtctggcagcgggtggcggctgcagga
ggtgagggcgatgtctga
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