Symbiobacterium thermophilum: STH2175
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Entry
STH2175 CDS
T00196
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sth
Symbiobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH2175 (sbcC)
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STH2175 (sbcC)
Archaeal homologous recombinant proteins
STH2175 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
AAA_21
ADIP
ABC_tran
SHE3
Motif
Other DBs
NCBI-ProteinID:
BAD41160
UniProt:
Q67MD3
LinkDB
All DBs
Position
complement(2325642..2329244)
Genome browser
AA seq
1200 aa
AA seq
DB search
MRPIRLAFAGLQSYREPQEIDFRELMGAGLFGIFGPTGAGKSTILDAITLALYGRVERTR
GTMGIMNLNENRLWVKFTFALGGTEYRVERSYRREKDTPSIRSEHARLVRVLPEGDEVLA
DREREVTQQVTDLLGLEIDDFTRAVVLPQGQFAEFLKLTGSKRTEMLQRIFALSQYGDVL
NERLKRRKEAVERQLDAVAGEQRGLGDASAEAVSAAEEALRQVTAALAEAERQLADTESR
FKEWERVWQLQQELAGITDELARWEAQAQAVDAARAELDAARRADAVRPHLTARDQAAAA
AARAERAVALAEQAVRDAEAEVARAAQAYAEARTNRMEQAPALTRRQADLQRAVELEDRL
EEARRQAGEVEEQVAALREKHDAVVRQIGEAEKRAAALRARETGLQEEIARLEVSPEERN
RITDAQRALDRLREAERALLQAEQRVRQREQELEHARRAAEQAEALRLEAERRLQEVESA
LQRLETEPPADEADLRAQEAWLGRAGEQIRTVAGLAAQYAQRQAEADARRREWEEAAARI
EQALLEEAQQQQAVEAAEQEREAVRAAVAAARRRAHAAALAQALTPGEPCPVCGSREHPQ
PAVVGEAVNLEAEEARLEQAEARLRAAGSALGRAQERTAAAREQAESARRRQAEAERALE
EARLALEAARERLPAAWRSLAGPQLEEALAREAAEHEERARRFAGWREQVAALQQAREER
TRALFAAAGDARERQAAVAHAEQALADARAEADARRSAAAECAAQFDAVRDDLDAAGVEA
ALRRIRDADERVADLRRSLAEVRTGQQELESRLGALRTEEKRCADELQEARVRHAQAVQR
YEEVADQWRRLSGGEPARPQLTAVESRLTRLAQEEEQAAAAKERAERAHGQAEAARAAAV
RELEVAHRHVAEAEAALAEALTVAGFESAEAARGALRLAARQAALDEEIRRHDQEGERLK
GRQAALEQQLAGRSISAEEWRAWVDRLEQARRSAAERREERARAMQVRDDLLAKQRRWQE
LEEQRLGLAARLDHLDELQKVLRGNAFVNFIAQEQMARVAADASRRLRQLTRDRYTLEAA
PDGSFLVRDETNGGTLRSVNTLSGGETFLASLSLALALSAQIQLHGHYPLEFFFLDEGFG
TLDPELLDVVISTLERLHFDRLNVGVISHVAELRNRLHRRVIVEPAEPGGRGSRLRLERA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccatccggctggcgtttgcggggctgcagagctaccgggagccccaggagatc
gacttccgcgagctgatgggcgccggcctcttcggcatcttcgggcccacgggggcgggc
aagtccaccatcctggacgccatcaccctggccctgtacggccgcgtggagcggacccgg
ggcaccatggggatcatgaacctcaacgaaaaccggctgtgggtgaagttcacgtttgcc
ctcggcgggaccgagtaccgggtggagcggagctaccgccgggagaaggataccccgtcc
atccgcagcgagcacgcccggctggtccgggtgctgcccgaaggggacgaggtgctggcc
gaccgggaacgggaagtgacccagcaggtcacggacctgttggggctggagattgacgat
ttcacccgcgccgtggtcctgccccaggggcagttcgccgagttcctgaagctgaccggg
agcaagcggacggagatgctccagcgcatcttcgcgctctcccagtacggcgacgtgctg
aacgagcggctgaagcggcggaaggaggccgtcgagcggcagctggacgcggtggcgggc
gagcagcggggcctgggcgatgcctcggccgaggcggtgtccgcggcggaggaggccctc
cggcaggtcacggcggccctggccgaggccgagcggcagctggctgacaccgagtcccgg
ttcaaggaatgggagcgggtgtggcagctgcagcaggagctggcagggataaccgatgag
ctggcccgctgggaagcgcaggcgcaggccgtggacgccgcccgggccgagctggacgcg
gcccggcgggcggatgcggtgcggccccatctgacggcgcgggatcaggcggcagccgcc
gcggcgcgggccgagcgggcggttgcgctcgcggagcaggcggtgcgggacgcagaggcg
gaggtcgcccgcgccgcgcaggcgtacgccgaggcccgcacgaaccgcatggagcaggct
cccgccctgacccggcggcaggcggatctgcagcgggccgtcgagctggaggaccggctc
gaggaggcccggcggcaggccggcgaggtggaggagcaggtggctgcgctgcgggagaag
cacgatgccgtcgtgcggcagatcggggaggccgagaagcgggcggctgcgctgcgcgcc
cgggagaccgggctccaggaggagatcgcccggctggaggtctcccccgaggagcgcaac
cggatcaccgatgcccagcgggcgttggaccggctgagggaagccgagcgcgccctgctg
caggcggagcagcgggtccggcagcgtgagcaagagctggagcacgcccggagggcggca
gagcaggcggaagcgctccgcctggaggcggagcggcggttgcaggaggtggagtccgcc
ctgcagcggctggagaccgagccgccagcggacgaggccgacctgcgcgcacaggaggcg
tggctcggacgggcgggcgagcagattcgcaccgtagcggggctggcggcgcagtacgcc
cagcggcaggccgaggcggatgcccgccgccgggagtgggaggaggctgcggcccgcatc
gaacaggccctcctggaagaggcgcagcagcagcaggctgtggaagccgcagaacaggaa
cgggaggccgtgcgggcggccgttgccgcggcccgcaggcgggcccacgcggccgccctg
gcgcaggccctgacgccgggagagccctgccccgtctgcggatcgcgggaacaccctcag
cctgccgtggtgggggaggccgtcaacctggaggcggaggaggcccggctggagcaggcc
gaggcgcggctgcgcgcggccggatcggcgctgggcagggcgcaggagcgcacggccgca
gcccgggagcaggcggaatccgcccgtcggcggcaggctgaggccgaacgggcgctggag
gaggcccggttggccctggaggccgcccgggagcggcttcctgcggcgtggcggtcgctg
gccgggccgcagctcgaggaagcgctggcccgggaggcggcggaacacgaggaacgggcc
cgccggtttgcggggtggcgcgagcaggtcgccgccttgcagcaggcgcgcgaggagcgc
acgcgggcgctgttcgcggcggcgggagacgcccgggagcggcaggccgcggtcgcacat
gccgagcaggccctggccgacgcccgggccgaggccgacgcgcggcggtccgctgcggcg
gagtgcgctgcacagtttgatgcggtccgggacgacctggacgccgcaggcgtggaggct
gcgctgcggcgcatccgggacgcggacgagcgggtggcggacctgcgccgatcgctggcg
gaggtccgcaccggccagcaggagctggagagccggctgggtgccctgcgaaccgaggag
aaacgctgcgccgacgaactgcaggaggcccgggtgcgccacgcgcaggcggtgcagcgg
tacgaggaggtcgcagaccagtggcgccgcctctccggcggcgagccggcgaggccgcag
ctgaccgcggtggagtcccgactcaccaggctggcccaggaggaggagcaggccgccgcg
gcgaaggagcgggccgagcgtgcgcatggacaggctgaggctgcccgcgccgccgccgtg
cgggagctggaggtggcgcaccggcacgtggcagaggcggaagccgcactggcggaagcc
ctgacggttgccggctttgagagcgcggaggcggcgcgtggggcgctgcggctcgcggcg
cggcaggctgcgctggacgaggagatccggcgccacgaccaggagggcgagcggctgaag
ggtcggcaggcggccctggagcagcagctggccggccggagcatcagcgccgaggagtgg
cgggcgtgggtggacaggctggagcaggcccgccggagcgccgccgagcggcgggaggag
cgggcccgggcgatgcaggtccgcgacgacctgctggccaagcagcggcgctggcaggag
ctggaggagcagcggctggggctggctgcacggctcgaccacctggatgagctgcagaag
gtcctgcggggcaacgccttcgtcaatttcatcgcccaggagcagatggcgcgggtggcg
gccgacgcctcccggcggctgcgccagctcacccgggaccggtacacgctggaggcggcg
ccggacggcagcttcctggtgcgggacgagaccaacggcgggaccctgcgctcggtgaac
acgctctccggcggcgagacgttcctggcctctctgtcgctggccctggcgctctcggcg
cagatccagctgcacgggcactatcccctggagttcttcttcctggacgagggcttcggc
accctggacccggagctgctggacgtggtgatctccacgctggagcggctgcacttcgac
cggctgaacgtcggggtgatcagccacgtggccgagctcaggaaccggctccaccgccgg
gtcatcgtggagccggctgagccaggcgggcgcggcagccggctgcggctggaacgggcg
tga
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