Symbiobacterium thermophilum: STH2271
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Entry
STH2271 CDS
T00196
Name
(GenBank) DNA polymerase III-like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03030
DNA replication
sth03430
Mismatch repair
sth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STH2271
03430 Mismatch repair
STH2271
03440 Homologous recombination
STH2271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sth03032
]
STH2271
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH2271
Enzymes [BR:
sth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STH2271
DNA replication proteins [BR:
sth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STH2271
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STH2271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
DUF5799
Motif
Other DBs
NCBI-ProteinID:
BAD41256
UniProt:
Q67M39
LinkDB
All DBs
Position
2442139..2443311
Genome browser
AA seq
390 aa
AA seq
DB search
MAITGAGFLGENGTKGGVDMRYNLVVIDTETTGLEYDQHRIIQIGVVAIKEQRIVKTWES
KLRLIDGEVSAYAMQVNRLDPSDMRSEKYPHPKAVLRKLQEEFLRPGVLLGAHNLSFDLG
FLQAEFARHGLPQWQGNFVDSMALGRALLPDLSASLESLARHFRVELTQHHDALADAVAT
AHVLLHLLDLAQQRGLDPLNLLIERQGRPIRYRPDNARVVTQEEILAELAKIQQQRAAAT
DTASARSASSGGLFSALRAAVRETVQKMAAPKYPLLPSPREALAYARDHQSGSRFVVRGV
SGRDVEVVVKYHPIRSSHPQHRHKLQRYQIFYRHKGQLYPYANAHTEKHQMDGRTLYLWE
YHDAYQALSEAALRQWLTKVLAGASQSIVG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggccatcacgggtgccgggttcttgggagaaaacggaacgaaaggaggggttgacatg
cgctataatctggtcgtcatcgacacggaaacaacaggactggagtatgaccaacaccgc
atcattcagatcggggtcgtagccatcaaagaacaacgcattgtaaagacatgggaatca
aagcttcgcctcattgacggagaagtgtcggcgtatgccatgcaggtcaacaggctggat
ccctctgacatgcgttcagagaaataccctcaccccaaagcggtgcttcgcaaacttcag
gaagaatttcttcggcccggcgttctgctcggcgcacacaacctgtcttttgatctgggc
tttcttcaggccgagtttgcgcgccacggtctgccccaatggcaggggaattttgtcgat
tccatggccctgggccgtgcattgcttcccgatctttcggccagtttggaaagccttgcc
cggcatttccgggtggaactgacccagcaccacgacgcactggccgatgcggtggcaacg
gcccacgtgcttcttcacctgctggatctggcccagcaacgggggctggatccgctaaac
ctcctcatcgagcggcaaggccgtcccatccgctaccgcccggacaacgcccgtgtggtg
acgcaggaagagatcttggcagagctagccaagattcaacagcaaagggccgctgcgact
gacaccgcatcggcccgatctgcttcgtcaggcgggttgttcagtgctttacgcgccgcc
gtcagggaaacggtacagaagatggccgcgccgaagtacccgcttctgccctcgccgcgg
gaggccctcgcctatgctcgtgatcaccagtccggttcccgctttgtggtgcgcggcgta
agcggccgagatgtcgaggtggtggtgaagtaccatccgattcgcagttcccatccgcag
caccgccacaagcttcagcgctatcaaatcttctatcggcacaagggccagctttaccca
tacgccaatgcgcacacggaaaaacaccagatggacggccgcaccctctatctttgggag
taccacgatgcctatcaggccctcagtgaggccgcactgcgccagtggctcaccaaggtg
ctggccggcgcgtcgcaaagcatcgtcggctga
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