Symbiobacterium thermophilum: STH2496
Help
Entry
STH2496 CDS
T00196
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03420
Nucleotide excision repair
sth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STH2496
03430 Mismatch repair
STH2496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH2496
Enzymes [BR:
sth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STH2496
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STH2496
MMR (mismatch excision repair)
Other MMR factors
STH2496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
BAD41481
UniProt:
Q67LG5
LinkDB
All DBs
Position
complement(2678288..2680303)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDLEAIVEGLNPAQRAAALHQDGPLLVIAGAGAGKTRTATHRLACLLARGVPPEAVMCI
TFTNKAAREMRDRAVALVGADARRVMIRTFHSAAMVLLRQYIGDFPESGRTPSFTVADPT
IQLALLKEAIAERNFDLKANRPESFLWRIGRYKNELADPESLLARQPSHDLMDWSRVLEM
IRSTDRYVNRLTAEIWKRYEEKLRRNDMVDFDDLINLFVQMLREKPDIRADLQRRFTYLQ
VDEFQDTNVAQLHMVKLLAGKRQNVMAVGDDAQSIYSWRSADIRCILEFERHFPGARTIL
LEQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVVAHEAETEVDEAKWVVQRIR
AGAEAGRRWGDFAILYRTTAQGRPFEEELREASIPYQVVGGPRFYDRREVQDSLAYLRLV
HNPRDSVSLERVLNAPRRGIGERGLQRLLALAAQRGVDLIAALRVAADEGVLQDEAAAGA
RQLHDHLRRAREALERQPGRFAAAMERLLRESGYLAYLQEEDRRKEERRSEVVESLIAAM
HEFERRSPDGGLGAYLDHLALLEGQEDESGGDVVKLQTIHSAKGLEYPVVFVVGMEQGLL
PYQRALEEGNLEEERRLCYVAITRAREELYLTGARVRWQRGEMVLTTPSQFLSEALGPGP
AQPLWVPASAD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgacctcgaagcgatcgttgaaggtttgaacccagcgcagagggcggccgccctg
caccaggacggcccccttcttgttatcgccggcgccggggccggcaagacccggacggcc
acccaccggctggcctgtcttctggccaggggggtcccgccggaggcggtcatgtgcatc
acattcaccaacaaggcggcccgggagatgcgggaccgggcggtggccctggtgggtgcg
gacgcccggcgggtgatgatccgcaccttccactccgccgccatggtgctcctccggcag
tacatcggcgacttcccggagagcggccggacgccttccttcaccgtcgcggaccccacg
attcagctggcgctgctgaaggaggccatcgccgagcgcaacttcgacctgaaggccaac
cggccggagtcgttcctctggcgcatcggccgctacaagaacgagctggccgaccccgag
tcgctgctcgcccggcagccctcccacgacctcatggactggtcccgggtgctggagatg
atccgcagcaccgaccggtacgtgaaccggctgacggcggagatctggaagcgctacgag
gagaagctccggcgcaacgacatggtcgacttcgacgacctgatcaacctgttcgtccag
atgctccgggagaagccggacattcgcgcggacctgcagcgccgcttcacctacctgcag
gtggacgagttccaggacaccaacgtcgcccagctccacatggtgaagctgctggccggt
aagcggcagaacgtgatggcggtgggcgacgacgcgcagtccatctactcctggcggtcg
gccgacatccgctgcatcctggagttcgagcgccacttcccgggggcgaggacgatcctg
ctggagcagaactaccgctccaccggggccatcatccgcgccgccaaccggctgatcgcg
cacaacgcgggccagaggcccaagcggctcttcaccgccgcgcccgaggggcggcccgtg
gtggcccacgaggccgagacggaggtggacgaggcgaagtgggtcgtgcagcgcatccgg
gcgggagcggaggccggccggcgctggggcgacttcgccatcctgtaccgcaccaccgcc
caggggcgccccttcgaggaggagctgcgggaggcgtcgatcccctaccaggtggtgggg
ggcccccgcttctacgaccggcgggaggtgcaggactcgctggcctatctgcggctggtg
cacaacccccgggactcggtcagcctggagcgggtgctgaacgccccgcgccggggcatc
ggggagcgggggctgcagcggctgctggccctcgccgcgcagcggggggtggacctgatc
gcggcgctgagggtcgcagccgacgaaggggtcctgcaggacgaggccgccgcgggcgcg
cgtcagctccacgaccacctgcgccgggcccgggaagccctggagcggcagccaggccgg
ttcgcggcggcgatggagcggctgcttcgggaatcgggctacctggcgtacctgcaggag
gaggaccggcgcaaggaagagcgccggtccgaggtggtggagagcctgatcgccgccatg
cacgagttcgagcgccgctcgccggatggcgggctcggggcgtacctggaccacctggcc
ctgttggaagggcaggaggacgagagcggcggcgacgtggtgaagctgcagacgatccac
tcggccaaggggctggagtacccggtggtcttcgtcgtgggcatggagcaggggctgctg
ccgtaccagcgggccctggaggagggcaacctggaggaggagcggcggctctgctacgtg
gccatcacccgggccagggaggagctgtacctgaccggcgcccgggtgcgctggcagcgg
ggggagatggtgctcaccaccccgtcgcagttcctttcggaggcgctgggcccggggccg
gcccagccgctctgggtgcccgcttccgcggactag
DBGET
integrated database retrieval system
