Symbiobacterium thermophilum: STH2826
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Entry
STH2826 CDS
T00196
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03420
Nucleotide excision repair
sth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STH2826
03430 Mismatch repair
STH2826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH2826
Enzymes [BR:
sth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STH2826
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STH2826
MMR (mismatch excision repair)
Other MMR factors
STH2826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DUF3553
Spore_III_AB
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
BAD41811
UniProt:
Q67KI7
LinkDB
All DBs
Position
complement(3042105..3044582)
Genome browser
AA seq
825 aa
AA seq
DB search
MRGRLLSGLNEQQREAVLHGQGPLLILAGAGSGKTRVIAHRIAHLILFGPEYDPDAPPPP
GLTADDLEALRLAVEGPGPIDTGAIAHLLGGGIDPWRILAITFTNKAAAEMRERVEQLVG
PRAREVWAATFHSTCVRMLRRDIERLGYGRNFVILDAEDQQAVIRDCLKRLGLSERQFQP
GAVLGTISNAKNAMLDPRRFADRAGDYWRQQVAKVYALYQEQLRSGNALDFDDLLLKAVE
LLERFDDVREYYQRKFEYILVDEYQDTNHVQNRWVFLLAGEKQNLAVVGDDDQGIYSWRG
ADISNILEFEAQFPGCRTIKLEQNYRSTQNILSAAYAVVRHNTGRKEKRLWTAAGPGDPV
YHFTAADERDEAAFVAREVERLVAEGLPDGTRLDYQDFAVLYRTHAQSRALEEAMVRRSI
PYGIYGGLRFFERKEIKDVLAYLRIIANPADIVSFRRAVGVPKRGIGPATVDKLVDYAEQ
WQVPVALAALDCSMVPGLSGTYQKRMEEFGALIEELTNLSAHCTVGQLIDAVLERTGILE
ELRADTSLEAAARLENVQELRSMAAEFEPPAGEELDGLRDLDSFLATVALLTDADQVGEG
QNKVTLMTLHSAKGLEFPVVFLVGLEEGVFPHNRALTDEVQMEEERRLCYVGMTRARLRL
YLTNAVSRNLWGQSNYNAPSRFLLEIPAELVEEVTPAAGASGPRRSAWDDGAAWEDAGAA
VRRPAWDGGARAARRREWEDDDFSPAIGAAGWGRTAQARRLQKALEPPSEETPQFQPGDR
VRHERFGEGVVKAVIGDTVTVQFAGAAGQRVLVASYLRPAAAEAE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggccggctgctctccgggctgaacgagcagcagcgggaggcggtgctgcacggt
caggggccgctgctcatcctggccggagcgggaagcgggaagacccgcgtcatcgcccac
cgcatcgcccacctgatcctgttcgggccggagtacgaccctgacgccccgccgcccccc
ggcctgacggcggacgacctcgaggcgctgcggctggccgtcgagggcccggggcccatc
gacaccggcgcgatcgcccacctgctgggtggggggatcgatccctggcgcatcctggcg
atcaccttcaccaacaaggcggccgccgagatgcgggagcgggtggagcaactggtgggc
ccgagggcgcgcgaggtctgggcggcgaccttccactcgacgtgcgtccgcatgctgcgg
cgggacattgagcggctgggctacggccgcaatttcgtcatcctggatgccgaggaccag
caggccgtcatccgggactgcctgaagcggctgggcctgtcggaaaggcagttccagccc
ggcgccgtgctgggcacgatctccaacgcgaagaacgccatgctggatccccggcggttc
gccgaccgggccggcgactactggcggcagcaggtggccaaggtctacgcgctgtaccag
gagcagctgcgctcgggcaatgcgctggacttcgacgacctcctgctgaaggccgtggag
ctgctggagcggttcgacgacgtgcgggagtactaccagcgcaagttcgagtacatcctc
gtcgacgagtaccaggacaccaaccacgtccagaaccggtgggtcttcctgctggccggg
gagaagcagaacctggccgtcgtcggcgatgacgaccagggcatctactcgtggcgcggg
gcggacatcagcaacatcctggagttcgaggcgcagttccccggctgtcggaccattaag
ctggagcagaactaccgctccacgcagaacatcctctccgccgcctatgcggtggtgcgg
cacaacacgggccgcaaggagaagcggctctggacggcggcgggccccggggacccggtg
taccacttcaccgccgccgacgagcgggacgaggcggcgttcgtggcgcgcgaggtggag
cggctggtggccgagggcctgcccgacggcacccgcctggactaccaggacttcgccgtg
ctctaccgcacccacgcccagtcccgcgcgctggaggaggccatggtgcgccgttccatc
ccctatggcatctacggcggcctgcgcttcttcgagcgcaaggagatcaaggacgtcctg
gcttacctgcgcatcatcgccaacccggccgacatcgtgtcgttccgccgggccgtcggg
gtgccgaagcggggcatcggcccggccacggtggacaagctggtggactacgccgagcag
tggcaggtgccggtggcactggccgccctcgactgctcgatggtgccgggcctctccggc
acctaccagaagcgcatggaggagttcggcgccctcatcgaggagctgaccaacctgagc
gcgcactgcacggtgggccagctgattgacgccgtgctggagcgcaccggcatcctggag
gagctccgggccgacacctcgctggaggcggcggcgcggctggagaacgtgcaggagctg
cgctcgatggccgcggagttcgaaccgccggccggcgaggagctggacggcctccgggac
ctggacagcttcctggccacggtggccctgctcaccgacgccgaccaggtgggcgagggg
cagaacaaggtgactctgatgaccctccattcggccaaggggctggagtttcccgtggtc
ttcctggtcggcctggaggagggggtattcccccacaatcgggccctgaccgacgaggtg
cagatggaggaggagcgccggctctgctacgtgggcatgacccgggcgcgcctgcggctc
tatctgaccaacgctgtcagccgcaacctgtggggccagtccaactacaatgcgcccagc
cggttcctgctggagattccggcggagctggtggaggaggtgaccccggccgccggtgcg
tccgggccgcgccggtccgcctgggacgacggcgccgcctgggaggacgccggggcggct
gtgcggcggccggcgtgggatggcggcgcgcgggctgcgcggcgccgggagtgggaggac
gacgacttctcgccggccatcggcgcggcgggctggggtcggaccgcgcaggcccgccgg
ctgcagaaggccctggaaccgccgtccgaggagacgccgcagttccagcccggggaccgg
gtgcgtcacgagcggttcggtgagggcgtggtgaaggccgtcatcggcgacaccgtgacc
gtgcagttcgccggggcggccgggcagcgggtactggtggccagctacctgcgcccggcc
gcggccgaggcggagtga
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