Symbiobacterium thermophilum: STH2968
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Entry
STH2968 CDS
T00196
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03420
Nucleotide excision repair
sth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STH2968
03430 Mismatch repair
STH2968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH2968
Enzymes [BR:
sth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STH2968
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STH2968
MMR (mismatch excision repair)
Other MMR factors
STH2968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAD41951
UniProt:
Q67K47
LinkDB
All DBs
Position
complement(3190541..3192490)
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AA seq
649 aa
AA seq
DB search
MPGAGKTTVLAYLAADLIAEGRHLPGRILIVTYTNSAVGNFKNRIGQFLEARGLPRAGFE
VRTIHSLAVQIVRERPEAIGWPDTFAVLDEVRRRTLVNALTAGWIAAHRDTWEALVREDV
RNRDQALARWAEHTPELMSRLIQSFKARQLSPDDALSLTRGLPDTEPLRWAAEIYRDYQR
ALAREGLVDFDDMMLGAYRLLTGEPDLLERLRQRWTYVFEDEAQDSYRLQEQVLRLLAGP
GGNFVRVGDPNQAIMGSFTTAEPALFRAFIREPGVDVRPLTMAGRSSQEIIDLANELVRW
TCQDYPEPGCRDALEPQYIQRVPRGMGQSNPEPEGRRVLVRDFPAYEEEMDRIAGLAARS
VRLYPEATVGVLLPTHAMVDRMLALLRDREAPAIPVGRTAPLERLRLGSDLLAALAFLAA
PHVPERRAAAARLEPYLDRWLADAVQPADVLLLRMAADLRLSGEDLALAQYLALRARRLL
EEEPLYGPGDVARELADALGRSGWLADALYDRQGFEPQPGVVYVTTCHAAKGLEWDTVYV
AGLTRGFFTGGLRDRTLSEQWSLVPGQVNPEARALALLDQLAGAGGVSEDPAAAFKREQI
GEKIRLLYVAITRARRNLLLSYHWRNERGYDTAPPPAVVRLRQFVQARR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcgccggcaagaccacggtgctggcgtatctggccgccgacctcatcgccgag
gggcgccacctccccggccggatcctgatcgtcacctacaccaactccgccgtgggcaat
ttcaagaaccgcatcggtcagttcctggaggctcggggcctgccccgcgcgggcttcgag
gtgcgcaccatccactccctggccgtgcagatcgtccgggagcggccggaggccatcggc
tggccggacacgttcgccgtgctggacgaggttcgccgcaggaccctggtcaacgccctc
acggccgggtggatcgccgcacaccgggacacctgggaggcgctggtccgggaggatgtc
cgcaaccgcgaccaggcgctggcgcggtgggcggagcacacccccgagctgatgagccgg
ttgatccagtccttcaaggcgcggcagctttcgccggacgacgcgctgtcactgacccgg
ggcctccccgacaccgagcccctccgctgggcggcggagatctaccgggactaccagcgg
gctctggcccgggagggactggtggacttcgacgacatgatgctgggagcctaccggctc
ctgaccggcgagcccgacctgctggagcggctccggcagcggtggacctacgtgtttgag
gatgaggcgcaggactcgtaccggctgcaggagcaggtgctccgcctcctggccggccct
ggcggcaacttcgtgcgggtgggcgaccccaaccaggcgatcatgggcagcttcaccacg
gcggagccggcgctcttccgggccttcatccgtgaaccgggggtggacgtccgccccctc
accatggccggccgctccagccaggagatcatcgacctggccaatgaactggtgcgctgg
acctgccaggactacccggagcccggctgccgggacgccctcgagccgcagtatatccag
cgggttcccagggggatggggcagtccaacccggagccggaggggcgccgcgtcctcgtc
cgggactttccggcctacgaggaggagatggaccggattgcggggctggccgcccggtcc
gtgcggctctacccggaggcgaccgtgggcgtgctgctccccacccacgcgatggtggac
cggatgctggcgctcctgcgggaccgggaagccccggccatcccggtgggcaggacggcc
cccctggagcggctgcggctggggtcggacctcctggccgccctggccttcctggcggcg
ccccacgtgccggagcggcgcgcggcggccgcccgcctggaaccgtacctcgaccgctgg
ctggcggacgccgtgcagccggcggatgtcctgctcctgcggatggcggccgacctgcgg
ctctccggcgaggacctggccctggcgcagtacctggccctgcgggccaggcggctcctg
gaggaggagccgctctacggccccggcgacgtggcccgggagctggcggacgccctcggc
cgatcgggctggctggccgatgcgctgtacgaccggcagggcttcgagccccagcccggc
gtggtgtacgtgaccacctgccacgccgccaaggggctggagtgggacaccgtctacgtc
gcgggcctcacccggggcttcttcaccggcggactgcgcgaccggaccctctcggagcaa
tggtcgctggtgccggggcaggtcaaccccgaggcgagggcgctggccctgctggatcag
ctggccggcgccggcggggtttccgaagatcccgcggcggcgttcaagcgggagcagatc
ggcgagaagatccggctgctctacgtggccatcacccgggctcgccgcaacctcctgctc
tcctatcactggcgcaacgagcggggatacgacaccgctcccccgccggcggtggtgcgg
cttcggcagttcgtccaggcgaggaggtga
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