Symbiobacterium thermophilum: STH3047
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Entry
STH3047 CDS
T00196
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sth
Symbiobacterium thermophilum
Pathway
sth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STH3047 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sth03021
]
STH3047 (rpoA)
03400 DNA repair and recombination proteins [BR:
sth03400
]
STH3047 (rpoA)
Enzymes [BR:
sth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STH3047 (rpoA)
Transcription machinery [BR:
sth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STH3047 (rpoA)
DNA repair and recombination proteins [BR:
sth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STH3047 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Mg_chelatase_C
Stathmin
Motif
Other DBs
NCBI-ProteinID:
BAD42029
UniProt:
Q67JX1
LinkDB
All DBs
Position
complement(3260310..3261257)
Genome browser
AA seq
315 aa
AA seq
DB search
MIGMEKPKIETVVLAEDNSYGKFVVEPLERGYGITLGNSLRRILLSSLPGAAVTSVKIDG
VLHEFSTLPGVVEDVTDIILNLKQLSLRMHSDEPKVLRLHAEGEGEVTAGDIHTDADVEI
LNPDLHIATLDKGGRLIAEITVSKGRGYVPADQNKTPDMPIGVIPVDSIFSPIRRVNYTI
EHTRVGNKTNYDKLTLEVWTNGAIRPDEACSWAAKILKEHLELFISLTEDADEIEVMQEK
EDDERNKLMEMTIEELDLSVRSYNCLKRAGINTIAELVSKTDEEMMKVRNLGKKSLEEVK
TKLAAFGLSLRQPDD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaatggaaaagcccaagattgagaccgtggtgctggcggaggacaacagctac
ggcaagttcgtggtggagcctctggagcgcggctacggcatcacccttggcaactccctg
cggcggatcctgctctcttccctgccgggcgccgcagtcacctctgtgaagatcgacggc
gtgctgcatgagttttccacgctccccggtgtggtcgaggacgtcacggatatcatcctc
aacctcaagcagctctcgctccggatgcacagcgacgaaccgaaggtcctgcgcctccac
gcggagggcgagggcgaggtcaccgcgggggacattcatacggacgccgatgtggagatc
ctcaacccggacctgcacatcgccaccctggacaagggcggccggctcatcgccgagatc
accgtcagcaaggggcggggctacgtgccggccgaccagaacaagaccccggacatgccc
atcggcgtgatccccgtcgactcgatcttctccccgatccgtcgggtgaactacaccatc
gagcacacccgcgtcggcaacaagaccaactacgataagctcaccctggaggtctggacc
aacggggccatccggcccgacgaggcctgctcctgggcggcgaagatcctcaaggagcac
ctggagctcttcatctcgctcaccgaggacgccgacgagatcgaggtcatgcaggagaag
gaagacgacgagcggaacaagctgatggagatgaccatcgaagagctggatctctccgtt
cgttcgtacaactgcctgaagcgggcgggcatcaacaccatcgcggagctggtctccaag
accgacgaagagatgatgaaggtccgcaacctgggcaagaagtcgctggaagaggtcaag
accaagctggcggccttcggcctttcgctgcggcaacctgatgactag
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