Symbiobacterium thermophilum: STH3254
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Entry
STH3254 CDS
T00196
Name
(GenBank) tetrapyrrole methylase family protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sth
Symbiobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
sth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sth03009
]
STH3254
Enzymes [BR:
sth01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
STH3254
Ribosome biogenesis [BR:
sth03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
STH3254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
HTH_23
HTH_22
Sigma70_r4_2
Sigma70_r4
UPF0122
GntR
HTH_28
HTH_10
TetR_N
VMAP-C
DUF5955
HTH_11
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BAD42236
UniProt:
Q67JB4
LinkDB
All DBs
Position
complement(3473726..3474481)
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AA seq
251 aa
AA seq
DB search
MIACEDTRETRKLLQHFQIDTPTTSYHEHNKRKAGPALIRRLLDGEDVALVSDAGMPAIS
DPGEELVRSALDAGIPVVPVPGPTALVTALVASGLPTGRFAFEGFLPHKGRERRRALERL
KDEERTLILYEAPHRLLETLHDLRETLGDRPMTAARELTKLHEEYVRGTVSQVIDHFNRN
APRGEFVLVVQGAEAEAPVAGAPDPALLAGEVAAFVAQGMDRKLAMKEVAQRFGVSRKAV
YQALLDAKDEK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcctgcgaggacacgcgggagacccgcaagctgctgcagcacttccagatcgac
acgccgaccaccagctaccacgaacacaacaagcgcaaggcgggaccggccctgatccgc
cggctgctggacggcgaggacgttgcactggtgtccgacgccgggatgccggccatctcc
gaccccggggaggagctggtgcgcagcgccctggacgccgggattccggtcgtgcccgtt
ccgggccccaccgcgttggtgacggccctggtcgcgtcgggcctgcctaccggccgcttt
gcgttcgaggggttcctgccccataagggccgagagcgcaggcgcgccctggagcggctc
aaggacgaggagcgcaccctgatcctctacgaggccccgcaccggctgctggagacgctc
catgacctgcgggagacgctgggcgaccggccgatgaccgccgcacgtgagttgacgaaa
ctccacgaggagtacgtgcggggcactgtctcgcaggtgatcgaccatttcaaccgcaac
gccccgcgcggcgagttcgtcctcgtggtgcagggggccgaggcggaagcccccgtcgcc
ggagccccggatccggcgcttcttgccggagaggttgcggccttcgtggcgcaggggatg
gaccgcaagctggccatgaaggaggtggcccagcggttcggggtctcccgcaaggccgtc
taccaggccctgctggatgcgaaggatgagaagtaa
DBGET
integrated database retrieval system
