Sphingobacterium thalpophilum: NCTC11429_00012
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Entry
NCTC11429_00012 CDS
T06778
Name
(GenBank) Outer membrane cobalamin receptor protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_00012
Transporters [BR:
stha02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11429_00012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
MetallophosN
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
VTR27600
UniProt:
A0A4U9U408
LinkDB
All DBs
Position
1:complement(23345..26431)
Genome browser
AA seq
1028 aa
AA seq
DB search
MRMMKFTIPVQRQRWLQYGILPLLFLLAALQLAFAQDKLVKGLVSDQQKQPIEGVTVSVK
GGTRSTTTDSKGTFTIEAGNGAVLVFTNVGYKTAEVPVGANNSVQVTLQSDDIAMEEVVV
IGYGTQRKEAVTGSVASVSGTTMNEVPAANISRALQGRIAGVNMQQNSSKPGSPMQIRIR
GTRSLTADNNPLIVLDGIPFAGSISDINPADIKSVDVLKDASATAIYGSRGANGVILVTT
NKGRMGQQAQLAYNGFTGLRTVFAKYPMMSGPEFAEIRRYVGQFQNTLDESDDTNTDWQD
LFYKNGMVNSHDISVNGGAEKGNYNFGAGYFRDEGVVPLQNYTRYNLRAALDQQVGKIFK
FGFNLNQSYSITNGNNLGLYGVLSASPIANPFNADGTLKSRIQQQTSGQQWVHTRESYEA
LGDSYINQQRVFGSYNNMYSEIRIPGVEGLIYRTNLGLNFRQNNDGSYTGQGVFSGTPDN
VSTASVANGRTVQWVMENLLTYDRTFAQKHNLNLVALYSAEQNTTNSTLISARDIPIDAF
QFYNIGRAQGEIIVNPDQQGYAKSSLMSFMGRAMYTFDNRYMLTMTMRRDGSSRLAPGHK
WHAYPAISAGWNIHNEKFRSAVPWINQLKLRLGYGQTSNQAVDPYKTLGLLSTRPYNFDT
QFLTGYYMSELPNPSLGWEFSKTYNYGLDFGLFNNRVSGTMEYYVQNTDNILLRVGLPPT
NGGGSYMANIGKTQNKGFELSLNGAVIDNENGWKWDVGVNLYANRNKLVELTSGSQRDEG
NQWFVGHPIDVIYDYKKIGLWQADDPYRDILEPGGNVGMIKVEYTGEYDANGVPTRAIGA
ADRQIINIQPNFLGGFNTRLAYKNVDLNVVGTFQNGGTLISSLYGSTGYLNQLNTRAGNN
VSVEYWREDRTDAKYPKPGGIQSGDNPKYGSTLGYFDASYLKVRTITMGYNFKQKWVERM
GIGRLRLYATVENPFVLFSPYHKESGGDPEPNSYGDENVAVGGLRRILVVGTNTPAMRSY
ILGLNLSF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgatgaagtttacgattcctgtgcaacgacaacgatggctacaatatggaata
ctgcccttgctctttttgctggcagctctacagctggcctttgcacaggataaactggtc
aaggggctggtctcagaccagcagaaacagcccattgaaggggtgaccgtatccgtcaag
ggcggcaccaggagcacgacaacagacagtaagggcacatttaccattgaggccggcaac
ggcgctgtgctggtcttcaccaatgtaggctacaaaacagccgaagtgccggtgggcgcc
aataacagcgtgcaggtgacgctgcaatccgatgatattgccatggaagaggtggtggtc
atcggttatggtacgcagcgcaaagaagctgtgacgggttcggtggcctcggtaagcggt
acgacgatgaacgaagtgcctgcagccaacatcagccgtgcgctgcagggccgtattgca
ggggtcaatatgcagcagaattcgtctaagccgggctctccgatgcagatccggatccgc
ggtacacgctccctgaccgccgacaacaatccgctgatcgtgctcgacggaattccgttt
gcgggttccatctcggatatcaatcccgcggacatcaagagtgtggatgtgctcaaagat
gcttcggcaacggcaatctacggttcgcgtggtgccaacggcgtgattctcgtgaccacc
aacaaggggcgcatggggcagcaggcacagctggcgtacaacggttttaccggattgcgt
accgtatttgccaaatatccaatgatgtccggtccggagtttgccgaaattcgccgctat
gtgggacagtttcagaacaccctcgacgagtcagacgataccaatacagactggcaggac
cttttctacaaaaatggaatggtcaacagccacgatatcagcgtcaacggtggggcagag
aaaggaaactacaacttcggcgccggttacttccgcgatgagggcgtggttcccctgcag
aactatacccgctacaatctgcgtgctgcactcgaccagcaggtgggcaagatatttaaa
tttgggttcaacctcaatcagagctacagcatcaccaatggcaacaacctaggcctgtac
ggcgtgctgagcgcctcgccgatagccaatccctttaatgcggatggcacactcaaatcc
cgtatccagcagcagacatcgggtcagcaatgggtgcatacccgcgagtcctatgaggcg
ctgggggacagctatattaatcagcagcgcgtgttcggttcgtacaacaacatgtacagc
gagatccggattcccggcgtggagggcctgatctaccgcaccaaccttggactcaacttc
cgtcagaacaatgatggcagctatactggacagggtgtattcagtggcaccccggacaat
gtgtccacagcttcggtcgcaaacggcagaacggtacaatgggtaatggaaaatctgctg
acttacgatcgtacctttgcgcaaaaacataacctcaatttggtggctctttattcggcg
gagcagaacaccaccaacagcacgctgatatcggcccgcgatattccgatcgatgcgttc
cagttctataacatcggccgcgcccagggggagatcattgtcaaccctgaccagcagggc
tatgccaaaagcagcctgatgtcttttatgggccgcgccatgtatacctttgacaaccgc
tacatgctgacgatgaccatgcgccgcgacggctcctcgcgactggcaccggggcacaag
tggcatgcctatccggcgatttcggcaggatggaatatccacaacgagaagttcaggtca
gccgtgccatggataaaccagcttaagctgcgcctgggctacggtcagacgtccaatcag
gcggtcgatccgtacaagaccctgggcttgctgagtacaagaccgtataatttcgatacg
cagttcctgaccggctactacatgtccgaattgcccaatccttcgctgggctgggagttt
tccaagacctacaactacggtctggacttcggtctcttcaacaacagggtcagcggtact
atggaatactatgtgcagaataccgacaatatattgctgcgcgtgggactgccaccgaca
aacggtggcggcagctacatggccaatatcggaaagacgcagaacaaaggctttgaactc
tccctcaacggcgcggtgatcgacaatgaaaacggctggaaatgggatgtgggagtcaac
ctctatgcgaaccgcaataagctcgttgaactgacctccggaagccagcgtgatgaaggt
aatcaatggtttgtcggccatccgatcgatgtgatctatgactacaagaaaattggcttg
tggcaggccgatgacccctatcgggatatcctggagccgggaggtaacgtgggaatgatc
aaagtggaatataccggagagtacgatgcaaatggtgtgcctacacgggcgatcggtgct
gcggaccggcagatcatcaatatccagcccaattttctgggaggcttcaatacgcgtctg
gcctacaaaaatgtcgacctgaatgtggtaggtaccttccagaatggcggtacgctgatc
agttcgctctacggaagtaccggctacctcaatcagctgaatacccgcgcgggcaacaac
gtgagcgtcgaatactggcgtgaagaccgtacggatgccaaatatccgaaaccgggaggc
atacagagtggtgataatcccaaatatggcagtacgctgggctatttcgatgcgtcgtat
ctaaaggtgcgtacgattacgatgggatacaactttaaacagaagtgggtggaacgcatg
ggtattggccgcctgcgcctctatgcgacggtggaaaatccattcgtcctcttctcgccc
taccacaaggaatcaggcggtgatccggaacccaactcctatggcgacgagaacgtcgcc
gtgggtggcctgagacggatactggtggtcggtacaaatacaccggcaatgagaagttat
attctggggctcaatctttcattttaa
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