Sphingobacterium thalpophilum: NCTC11429_00225
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Entry
NCTC11429_00225 CDS
T06778
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00906
Carotenoid biosynthesis
stha01100
Metabolic pathways
stha01110
Biosynthesis of secondary metabolites
Module
stha_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NCTC11429_00225
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
stha01006
]
NCTC11429_00225
Enzymes [BR:
stha01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
NCTC11429_00225
Prenyltransferases [BR:
stha01006
]
Terpene biosynthesis
Squalene/phytoene synthase
NCTC11429_00225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
polyprenyl_synt
DUF3867
Ku_C
Motif
Other DBs
NCBI-ProteinID:
VTR28559
UniProt:
A0A4U9U9J9
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Position
1:complement(264308..265144)
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AA seq
278 aa
AA seq
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MKKLFDELAYEVSKKTTEKYSTSFSLGILALKPSIRDSIYAIYGYVRLADEIVDSFYGYD
RQRLLGRLYLETDYALEERISLNPILQSFQETVHKYAIDRELINQFLHSMTMDLKQVDYN
AERYKEYIYGSAEVVGLMCLQVFTEGNKQRYEELKPYAMKLGSAFQKINFLRDIKEDYHV
LGRTYFPNLNMDVFDNSLKGQIEDEIHSEFKEALLGIKKLPKTARFGVYLAYKYYLSLFA
KIRKKSSKEILENRIRIANTEKVYVAFKSYLRYKVAYL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctatttgatgagctggcttacgaagttagcaaaaagacaacagaaaaatac
agcacgagtttttcgctcggtattttagccttgaaacccagtatacgcgatagtatttat
gccatttacggttatgtaagactggcagacgaaattgttgacagtttttatggctatgat
cggcaacgcttgttgggacgtctctacctggaaacggattatgcccttgaagagcggatt
tctttgaatccgatattacagtcttttcaggagacagttcacaagtatgcgattgaccgc
gaactcataaaccaatttcttcatagtatgacaatggacctcaagcaggtggactataat
gctgaacgttataaagaatatatttatggatctgctgaagtcgtcggcttgatgtgtctt
caggttttcactgaaggtaataaacagcgttatgaggagttgaaaccttacgctatgaaa
cttggatcagcatttcagaaaataaattttttacgtgacatcaaagaggattatcacgtt
cttggtcgcacctactttcctaatttgaatatggatgtattcgataactcacttaaaggt
caaattgaggacgaaatccatagcgaatttaaagaagctctcttaggaataaaaaagctg
ccaaaaacagctagatttggtgtctatctggcttacaaatattatctttcactttttgcg
aagatcaggaaaaaatcctcaaaagagattttggaaaacagaatccgcatagcaaataca
gagaaagtttatgtagcctttaagagctacctgcgttataaggtagcttatttatag
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