Sphingobacterium thalpophilum: NCTC11429_00344
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Entry
NCTC11429_00344 CDS
T06778
Name
(GenBank) Probable TonB-dependent receptor NMB0964 precursor
KO
K02014
iron complex outermembrane recepter protein
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_00344
Transporters [BR:
stha02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11429_00344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
DUF3869
SpaA
Motif
Other DBs
NCBI-ProteinID:
VTR29074
UniProt:
A0A4U9UHR5
LinkDB
All DBs
Position
1:387152..389446
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AA seq
764 aa
AA seq
DB search
MKNYILGSILTFVCSFYLFSATAASISGKITDAKTGQPIAGATISLLQLRSSTSSDQAGR
YAFKSLPSSGRYLIEVRYIGYQSLIRTVDLTAEDVTLDVVLTESIIETNEVVVTGTLVTA
QSRRNSTSVSVISKDELQGNATNFIDALARQVPGLSQVTTGQGISKPVIRGLGYNRVVTV
NNGVKQMGQQWGDEHGIEIDQNQPDRVEVLRGAASLMYGSDAIGGVINVLDPNAPAPGEI
KGELLSSYSTNNGLTNNSLMLTGNQNGFVWRGRGSYQNAYAYNTPAGRYINSGFNNSSAS
GMVGLNKQWGFSHLNFSYLKNNIGFHEAEPGDVLYGNSKSRRLDYPKQDIRHYKVSMNNN
FVIGTGHLKLDLGYQKNQRRELEEATPSLFFDLNTYSLDAKYYLGETNGWQKIFGISASQ
EHSVNKGNEFLIPAYDQVELGAFGYAKKTWDANTFSLGLRYDYVNSKGKQLIVDDEEQFP
GFRNKFSNVSTALGFTHSFSEDLNFKANAGSAFRAPNPAELGSNGVHEGTARYEIGNENL
KAERSYQADAMLEFGHSIVTGSIGIYENYIHNFIYASAQKGDVKTIVDEDDNTHTYDVYR
YGQVNANLFGFEGSLNFHLMNWIHLDNNFSYTHAQNNTFDRPLALIPAAVLHNTLRLEPK
IRGLHAFYFAVGLDNYFKQNRIDETFETAAASYTLLNASLGTTLHLGRQPLKVYASASNL
TDKRYYDALSRLRPGRLSQEDPSFGVYNMGRNITVGVYLPFTIK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactacatattgggcagcatattgacatttgtctgctccttctacctattttcg
gcaactgctgcaagcatatccggcaaaatcaccgatgccaaaacaggccagcctattgcc
ggcgcaacaatatcgctattgcagcttcgctcaagcacctcttccgatcaagctgggcga
tacgctttcaaatccctcccctccagcgggcgatatctcatcgaagtgcgctacatcggc
taccagtcacttatcagaaccgtggacctgaccgccgaagatgtcaccctggatgtcgtg
cttacggaaagtatcatcgagaccaatgaggtcgtggtgacaggaacactggtgaccgca
cagagccggcgcaacagcacctccgtgtccgtaatctccaaagatgagctgcagggaaat
gcaacaaattttattgatgccttagcacgccaggtgccgggtttgagccaggttacgaca
ggacagggcatctccaaacctgtcatccgtggactgggctacaaccgtgttgtcaccgtc
aataatggtgtgaaacaaatgggacagcaatggggggacgaacacggtatcgagatcgac
caaaaccagcccgatcgcgttgaagtactacgtggagcagcttctctcatgtacggatcg
gatgccattggcggtgtcatcaatgtgctggatcccaatgccccagctcccggtgaaata
aaaggtgaactgctgtccagctactcgacaaataatgggttgacaaacaattcattgatg
ctaacaggtaatcagaatggctttgtctggcgtggacgcggatcttatcagaatgcctat
gcgtataatacgccagcaggcaggtacatcaatagcggcttcaacaacagcagtgccagc
ggtatggtcggcctcaacaagcaatggggattttcccacctaaacttctcgtacctgaaa
aataacattggctttcatgaggccgaaccgggagatgtgctatatggcaactccaaaagt
cgtcgtctggattacccaaaacaggatatccgccactataaggtctctatgaacaacaat
tttgtgatcggtacaggtcacctgaaactggatctagggtatcaaaaaaaccaacgccgg
gaactggaagaagcgactccctcactattttttgatctcaacacctattcattggatgcc
aaatactatctgggcgaaaccaacggctggcaaaagatctttgggatcagtgccagtcag
gaacatagtgtaaataaaggaaatgaatttttgattccagcctatgaccaggtcgaactg
ggcgccttcggatacgccaaaaagacctgggatgccaacacctttagtctaggcctgcgt
tacgattatgtcaacagtaaaggcaagcagcttatcgtggatgatgaagaacagtttccg
ggattcagaaacaaattcagcaacgtcagtacggcattgggctttacacatagcttcagt
gaagatctcaatttcaaagccaacgcaggctcggcctttagggctccaaacccagccgag
ctgggctctaacggcgtccatgagggaaccgcccgctatgaaatcggcaacgaaaatctg
aaggcggaacggagttatcaggctgacgccatgcttgagtttggtcatagcatcgtgacg
ggaagcatcggaatctacgagaattatatccataatttcatctacgcatcggctcagaaa
ggtgacgtaaaaacgatcgtggacgaggacgacaatacccatacctacgacgtatatcgc
tatgggcaggtaaacgccaacctcttcgggtttgaaggaagtctaaactttcacctgatg
aactggatccatctggacaacaacttcagttatacgcacgcacaaaacaatacctttgac
cggcccctagccttgattcctgccgctgtgttacacaacacattacgactggaacctaag
atccgaggtctgcacgccttctacttcgctgtcggactggacaattattttaaacagaat
cgaatcgacgaaaccttcgaaacggcagcagcttcatacacactgctcaatgcgtctctg
gggacgactctacatctaggaaggcagccgctaaaggtgtacgcttcggcatccaatctg
actgacaaacgttattatgatgccctgagccgattacggccgggaagattatcacaagaa
gaccctagtttcggggtttataatatgggaagaaatattacggtaggggtctacctgccc
ttcaccataaaataa
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