Sphingobacterium thalpophilum: NCTC11429_00400
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Entry
NCTC11429_00400 CDS
T06778
Symbol
xerD_1
Name
(GenBank) Tyrosine recombinase XerD
KO
K03733
integrase/recombinase XerC
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stha03036
]
NCTC11429_00400 (xerD_1)
Chromosome and associated proteins [BR:
stha03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NCTC11429_00400 (xerD_1)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Int_N
DUF6706
Motif
Other DBs
NCBI-ProteinID:
VTR29331
UniProt:
A0A4U9UIZ3
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All DBs
Position
1:complement(457891..458772)
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AA seq
293 aa
AA seq
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MLEKEFIRFLQIEKRYSEHTVIAYRHELDMFRDFLTAEGLEVKDVVYRDLRHYFAQMMEG
GKNASSVNRSMSSLRTYFKFLQREDYIVKNPMTLIKALKTAKKLPVVVEKDKLVRLLDHM
EQQQEDFESCRNYIVMELLFGTGIRLAELLKIKEQDIDFFNKKILILGKRNKERLVPIND
VLLKELKNYLQQKATQFVDTDNSLLIVTRAGKPAYAKLIYDIVHKHLTLISTQGKRSPHI
LRHTFATALLDNGADLNAIKELLGHAGLAATQVYTHNSAERLKSIYKQAHPKA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaaaggagtttattcgttttttacagattgaaaaaaggtattcggaacatacg
gtgattgcctatcggcatgagctggacatgtttcgggactttttgaccgccgaaggactg
gaggtgaaggatgtggtctaccgtgatctgcgccattactttgcgcaaatgatggaaggc
ggtaaaaatgccagctctgttaaccggagtatgtcgtcgttgcgtacctatttcaaattt
ctgcagcgggaggattatattgttaagaatccgatgaccttaatcaaggctttaaaaaca
gctaaaaagttaccggtcgtggtcgagaaggataagttggtccgtctattggatcacatg
gagcagcaacaggaggattttgaatcctgccgcaattacattgtgatggaattgctcttt
ggtacaggaatccgcctggccgaattgttgaaaattaaggaacaggatatcgattttttt
aacaaaaaaatccttatattaggtaaaaggaacaaagaaaggctcgttccgataaatgat
gttttactgaaagaattgaaaaactatttacaacaaaaagcgacgcaatttgttgatact
gataatagcttattgatcgtgaccagagcggggaaaccagcgtatgccaagctgatttat
gatattgtgcataagcatctgacgctgatttctacccaaggtaaacgaagccctcatatc
ttgaggcatacgttcgcaaccgccctgttggacaatggggccgatttaaatgcaattaaa
gaactgctgggacatgcaggcctggcggcaacgcaggtctacacgcataactcagcagag
cgattgaagtcaatttataaacaagctcatccaaaagcttaa
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