Sphingobacterium thalpophilum: NCTC11429_00523
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Entry
NCTC11429_00523 CDS
T06778
Name
(GenBank) ATP-dependent helicase HepA
Organism
stha
Sphingobacterium thalpophilum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
VTR29859
UniProt:
A0A4U9UD22
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Position
1:570728..574051
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AA seq
1107 aa
AA seq
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MDFHEHSLTTIDFKNISRYSYFPWMDTSSSSSQVNPVAIELNRGIFYVQDQYTRFQVMVV
HQPPVTTVFCNCSQKGFCSHQKATLTKLFGQESWLSFFDSKRYGKLLQKVASQYGLENEM
SLEQYFGAEIRDGELQFVLKDKQLTSIDDFDLLGPVTAGALTANEEQHRFVVLTRSRYYR
HLQVRLCQAPLAKSGTPKNPVSVKDSQTAIWRTNSVEETQFFTAISQLAQPILQQEQDIV
PPLKALVRNPLSLPFYLHDFDKGEHITASALSPIQVSLHKGEIQLSIEQDKTFYTICGKW
SIHGIAYNLQDINIVFDHFIMVNKQLYLLDDKIHLKLFRLFIQKGQCLRVHQSKFNAFSK
LFLDPLANTVELRFKDIPQANKLQLKESLYYQDMQPLLFLEESEDFVNIIPVMRYGDVEV
PILSKRNIFGTDTKGKQFLVDRKKEAESKIIALLLKQHPYFQEQLDEGSFQHFYLHRRYF
LDKDWFLEAFDEWHRQGIHIIGFNTLRGNKLSRFKGKIHVEVLSGLNWFNATIQVQFGPK
SVSLKKMEKAVRNRSQFITLDDGTLGILPTEWLDKFESYFSAATVIEDSSIQIPKYRFNE
IDNIFGPNELDQSVSDELKSLRHRLSSWAALPPTEIPDSFTGTLRPYQQQGVQWLSVLDQ
LHFGACLADDMGLGKTVQVLAFLSLQKKLGHAHPTLLVLPTTLIFNWRREIQQFLPSFEV
LVLDGSKRLSMTGQLANADIALISYHNLLTDINVLKKYTFNYVILDESQQIKNPDSQRYK
AVNLLRSRNRIILTGTPIENNTMDLFSQISFIVPGLLGDKKYFKDVYTMPIDAFHDRKRK
QMLREKIRPFILRRTKQDVLEDLPAKNELVLYCEMKTAQRRIYDLYEKEFREFISAKDGD
EIRKSPMHVLKGLTKLRQICNSSKLLQGEELTVAEDSAKIEMLVEQIQHKKEQHKIIVFS
QFVSMLDLIRHALNKNGIPTLMLTGQSKNRGQLVSEFQSNQDLRVFLISLKAGGTGLNLT
AADVVYLVDPWWNPAVEQQAIDRIYRIGQQKQVTAVRLISPDTVEDKIQQLQQHKKEISS
SILEEGGSLNAFYLDKDYLLDILGKSL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggacttccacgaacacagcttaacgacaatagattttaagaacatcagccgctattca
tattttccctggatggatacctccagttcatctagccaggtcaatcctgtcgcaattgag
ctaaaccgcggcatattctacgtacaggaccaatatactcgcttccaagtgatggtcgta
caccaaccaccggtcacgaccgtcttttgtaattgtagtcagaaaggcttttgcagtcat
cagaaagctacattgacaaagttgtttgggcaggaaagctggctttcgtttttcgattca
aagcgctatggcaagctgttacaaaaagtagcttcacagtatgggctcgaaaatgagatg
tcgctggagcaatactttggagcagaaatccgcgatggtgagctgcaatttgtactgaag
gacaaacagctgacctccattgacgattttgaccttctgggaccagtcacagcaggcgca
ctaacagcgaatgaagaacagcaccgttttgttgttctgacacgtagccgctattaccga
catttgcaggtgcggctttgtcaggcaccgcttgcgaaatcgggaacgcccaaaaaccca
gtttctgtcaaagacagccaaacagctatctggcgcaccaattcggtggaagaaacgcag
ttttttacagcgatcagccagctggctcaacctattctccagcaggaacaagacattgtg
ccgcctttgaaggcgctcgttaggaacccgctttctctgcctttttatctccacgacttt
gataagggggaacatatcaccgccagcgcactgtctccaatacaggtcagcctgcacaaa
ggcgaaatacagctcagcatcgaacaggataaaaccttttacaccatttgcggaaaatgg
agtatccatggtatcgcctataatctgcaggacattaacattgttttcgaccattttatt
atggtcaacaagcagctttatctgttggacgacaaaattcatctgaagctctttcgccta
ttcatacaaaaggggcaatgcctacgggtacaccaaagcaagttcaatgcatttagcaag
ctttttttggatcctctcgcaaatacagtggaattgcggttcaaggatattccccaagca
aacaagctgcagctaaaggaaagcctctattatcaggatatgcagcccttgctttttctg
gaggaatcagaagattttgtaaatattattccggtcatgcgttatggagatgtggaagtc
ccgatactcagcaagaggaacatattcgggacggataccaagggaaaacagtttttggtg
gaccgcaagaaagaggcggaaagcaaaatcatagcgctgctgctcaaacagcacccctat
tttcaggaacaattggatgagggcagctttcagcatttctacctgcaccgtaggtatttt
ttagataaggactggtttttggaagcgtttgatgaatggcataggcaaggaattcatatt
attggattcaatacgttacgtggcaataagttaagccgctttaaggggaagatacacgta
gaggtgctaagcggtctgaactggttcaacgcaacaatacaggtccagtttggcccaaaa
agcgtttcgctcaagaagatggaaaaagctgtccgcaaccgttctcaatttatcaccttg
gatgacggcactttggggatattaccaacggaatggttagacaaatttgaaagctacttt
agtgctgcaacggtcatcgaggattcatctatccagattcccaaatatcggtttaacgag
atcgacaacatcttcggtccgaacgagcttgatcaatccgtatcagacgaactaaaaagt
cttcgccaccggctttcctcttgggcagctctcccgccaaccgaaatccccgacagcttc
acaggaaccctgcgaccctatcagcaacaaggagtacaatggcttagcgttctggatcag
ctccattttggcgcatgtctcgctgatgacatggggcttggaaaaaccgtacaggttttg
gcttttctgtccctacaaaagaaattgggacacgctcaccctacgcttctggtgcttccc
acaaccttaattttcaattggaggcgtgaaatccagcaatttctcccttcgtttgaggtt
cttgtactggatggcagtaagcggctatcaatgaccggtcagctcgccaatgctgatatc
gcactgatctcctatcataatctactgacggacatcaatgtactgaaaaaatatacattc
aactacgtaatactcgacgagtcccagcaaattaaaaatccagattcgcaacgctataaa
gcggtcaacttattacgttcgagaaaccggatcattttaacgggcacacccattgagaat
aataccatggacttgttttcgcagatttcttttattgtccccgggctcttgggagataaa
aaatattttaaggacgtctataccatgcctattgatgcttttcacgaccgaaagagaaaa
caaatgttgcgcgaaaaaatcaggccttttatccttcgcagaaccaagcaggatgtactg
gaggatcttccggcaaaaaatgagcttgtgctgtactgcgaaatgaagactgcccagcgg
cgtatctacgatctctacgaaaaggaattccgcgaatttatctcagccaaagacggtgac
gaaattagaaagagtcccatgcacgttcttaagggcctgacaaaattgcgccagatctgc
aattcaagcaaactgctccaaggcgaggagctaactgtggctgaggactctgctaagatc
gaaatgctggtcgaacaaatccagcataaaaaggaacagcataaaatcatcgtgttctca
cagtttgtcagtatgctcgatctcattcgccatgcactgaacaaaaacggtattcccaca
ctcatgctgactggccaatccaaaaatcggggtcagctggtgagcgagttccagtctaac
caggacttacgggtatttctcatcagtttaaaagctggtggtacagggctgaatctgacg
gctgccgatgtggtctacctagtggatccctggtggaatccggctgtagagcaacaggcc
atcgaccgcatctatcgcatagggcagcaaaagcaggtcaccgccgttcgactgatcagc
cccgatacagttgaagacaaaatacagcagctccaacagcataaaaaagaaattagcagc
agtatccttgaggaagggggaagtttaaacgcattctatctcgacaaagactacttgctc
gatatacttggcaagagcctctaa
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