Sphingobacterium thalpophilum: NCTC11429_00820
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Entry
NCTC11429_00820 CDS
T06778
Symbol
mutS_1
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC11429_00820 (mutS_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_00820 (mutS_1)
DNA repair and recombination proteins [BR:
stha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCTC11429_00820 (mutS_1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS_C
GeBP-like_C
Motif
Other DBs
NCBI-ProteinID:
VTR31384
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All DBs
Position
1:complement(887530..890106)
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AA seq
858 aa
AA seq
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MQQYNAIKVKYPGALLLFRVGDFYETFGEDAIKAAQILGIVLTKRGNGSESETALAGFPH
HSLETYLPKLVRAGQRVAICDQLEDPKTTKTIVKRGVTELVTPGVSYNDNIVQQKSNNYL
ASIFTEKDRIGISFLDISTGEFLVAQGNAAYIDKLLQGFKPTEIILPKKQSKDFIEQFGS
QYYTYFLDEWPYTGDYATEALLKHFEVSSMKGFGVDRMPVGLVAAGVALHYLNETEHRNL
QHISTLSRIEEDRFMWLDRFTIRNLELIGSMNENAVTLSDVLDHTASPMGARLLRRWIVM
PLKDRKSIQERLNVVDFFYNDRDLRDELIGQIKQVGDLERLISKIGLQKANPREIVQLKR
ALYAIEKLKELTDREDAEALRSISQQLDACTAIRDRIERQLQAEPPVAINKGSVIAEGVD
PELDRLRKIAFGGKDYLLEIQKRESESTGIPSLKIAFNNVFGYYLEVTNTHKDKVPADWI
RKQTLVNAERYITEELKEYEEQILGAEEKIQALETRLYAELLAAIAEFIKPVQLNAQLIA
KLDVLLNFAVVAEKNYYVKPEVSDSKILDIKGGRHPVIEKNLPIGEDYITNDTFLDPSAQ
QIIIITGPNMAGKSALLRQTGLIVLMAQIGCFVPAKEAKIGVVDKIFTRVGASDNLSSGE
STFMVEMNETASIMNNLSDRSLILLDEIGRGTSTYDGISIAWAIAEFLHNHPSAKAKTLF
ATHYHELNELTTSLDRIKNYNVTVKEVNNKVIFLRKLVPGGSEHSFGIHVAKLAGMPPKL
LNRANQILKRLEQERTGGEQIKDSMRKIQKQAYQLQMFAIDDPVLNKIRDMLNNLDVNSL
TPVEALMKLDEIQRLLKN
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtataacgcgatcaaggtcaagtatcctggcgcattgttgctgttccgtgtt
ggcgatttttatgagacgtttggtgaggatgcgatcaaggctgcgcagattttgggcatc
gttctgacgaaacgcggcaatggttcagaatccgaaacggcgctggcgggcttcccgcat
cattcactggagacttaccttcccaagctcgtgcgcgcagggcaacgggtagccatctgc
gatcagctggaagatcccaaaacaaccaaaacaattgttaaacgcggggtcacagaactg
gtaacaccgggggtttcttacaatgacaacattgttcaacaaaagtccaacaattatctg
gcttccatttttaccgaaaaggataggatcgggatttcttttttagatatctctacgggt
gaatttttggtggcgcaaggaaatgctgcctacatcgataaactgctgcagggttttaaa
ccaactgaaatcatcctccccaaaaagcagagcaaggattttatcgagcaatttggatca
caatattacacctattttttggatgagtggccttataccggcgactacgcaactgaggcc
ttgttgaagcactttgaggtgagttccatgaagggcttcggggtagaccgcatgcctgtg
gggcttgtcgctgccggagtcgcattacattatctgaatgaaaccgaacatcgtaatctg
cagcatatttctacactgtcccgcatcgaagaagaccgttttatgtggctcgacaggttc
acgatccgcaatctggaactgatcggttcgatgaatgaaaatgcagtcaccttgtcggat
gtcctcgatcatacagctagtccgatgggagcaagattgctcaggcggtggattgtgatg
cccctgaaggatagaaagagcattcaggaacggcttaatgtcgttgatttcttttacaac
gaccgggacctgcgggacgagcttattggccagatcaaacaagtgggagacttagagcgt
ttgatatccaaaattggtcttcaaaaagcaaatcctagagagattgtgcaattaaaacgt
gctctttacgcgattgagaaactaaaggaactgacagaccgtgaggatgccgaagcgctt
cgttccatttcccagcaattggacgcttgcacggccatccgtgaccggatcgaacggcag
ctgcaggccgagccgccagtggccatcaataaaggtagtgtcattgccgaaggtgttgat
cctgagttggaccgcctgcggaagattgcatttggcggtaaggattatctgctggaaatt
caaaaaagagaatctgagtcaaccggcattccttcactcaagatcgcttttaacaacgtc
tttggttactatctcgaagtgaccaatacgcataaagataaggtccctgctgactggatc
cgcaaacagacgctggtgaatgctgagcgttatatcaccgaagagctcaaagagtatgaa
gagcagattcttggtgctgaggaaaagatacaggcactggaaaccagattatatgccgag
ttactggcggctatagctgagtttattaaaccggtacagctcaatgcccagctcattgcg
aagctggatgtgctgctcaattttgctgttgtggcagaaaagaactactatgtgaagccg
gaagtcagcgacagcaagattttggatatcaaaggtggccggcatcccgtcattgaaaag
aacttgcccataggggaggattatatcacaaatgatacctttctcgaccccagtgcacag
cagatcattattattaccggtccgaatatggccggtaaatcggctttgttacgccagacg
ggactgatcgtgctcatggcacagatcggttgttttgtgcccgccaaagaagcaaagatc
ggtgttgtggataagatatttacccgtgtgggagcttcggacaacctctcttccggagag
tctactttcatggtggaaatgaacgaaaccgcaagtatcatgaataacttgtccgaccga
agcttgattctactcgatgagatcggacgtggtaccagcacctatgacgggatttccatt
gcctgggcgattgccgaattcctgcataatcatcccagtgctaaggcaaagaccttgttt
gccacccattatcacgagctgaatgagctgaccacttcgcttgaccgtatcaaaaattac
aatgtcacagtgaaagaagtcaataacaaagtgatctttttacggaagcttgtaccggga
ggctccgaacatagcttcggaatacatgtcgccaaactggcgggtatgccgccaaaactg
cttaaccgtgccaatcagatcttaaagcggctggaacaggagcgcacaggcggtgaacag
atcaaggatagtatgcgcaaaatccagaagcaggcttatcagttacagatgtttgccatt
gatgatccggtactgaataagattcgggatatgctcaataacttggatgtcaactccctt
actcctgtagaagcactgatgaaattggacgaaatacagcgtttgctgaaaaattag
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