Sphingobacterium thalpophilum: NCTC11429_01529
Help
Entry
NCTC11429_01529 CDS
T06778
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stha03009
]
NCTC11429_01529 (rimO)
Enzymes [BR:
stha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC11429_01529 (rimO)
Ribosome biogenesis [BR:
stha03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC11429_01529 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
VTR35565
UniProt:
A0A4U9UPA3
LinkDB
All DBs
Position
1:complement(1733359..1734765)
Genome browser
AA seq
468 aa
AA seq
DB search
MSEYDSHHLFGLRSYFLTNPSHNMKTKYAKPAPLTNKPRVNVVTLGCSKNIHDSEVLMGQ
LKGNQMEVVHEASNIQENDIVVINTCGFIDNAKQESIDAILQYSELKDQGKINKVIVTGC
LSERYKPELEAEIPSVDAYFGTNDLPDLLSTIGADYRHELLGERLLTTPSHFSYFKIAEG
CNRPCSFCAIPLMRGKHVSKSIEDLVKEAKFLASNGTKELILIAQDLTYYGLDIYGKRNL
SDLMRHLSDVDGIEWIRLQYAYPSGFPMDILDAMNERSNICNYLDMPLQHISDPMLKSMR
RGTTKQKQIDLVHAIRDKVPDIALRTTLICGYPGETEQDFQEMLEWVEETRFDRLGCFTY
SHEEKTHAYTLEDDVPQEVKEERVEAIMEVQQGISYDINQTKVGNSYKVLVDRIDGDYFI
GRTEYDSPEVDNEVLIAAAASYARIGDFVQVKIDRAEDFDLYGEIIKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaatacgacagccatcatctctttggcctgcgttcttatttcttgacaaaccct
tctcataatatgaagacaaaatacgcgaagccagcaccattaaccaataaaccccgcgtg
aatgtggttactttgggctgttcgaaaaatattcacgacagtgaagtactgatgggccag
ctgaaaggcaaccagatggaagtcgtgcatgaagcatctaatattcaggagaatgatatc
gtagtcatcaacacctgcggcttcattgataatgctaaacaagagtcgatcgacgctatt
ttacaatattcagaattaaaagatcaaggaaagatcaataaagtcatcgtgaccggttgt
ctttccgaacgttataaacccgaattagaggctgaaataccgagtgttgatgcctatttt
gggacaaatgacctaccggatctgctttccaccatcggcgcagactatagacatgaactg
ctgggcgaacgcttgctgaccacgccttcccatttttcgtattttaaaatagcagaaggc
tgtaaccgtccctgctcattctgtgccataccgttgatgcgtggcaaacacgtatcaaaa
tctattgaagatctggttaaagaggctaaatttctggcatcgaatggaacgaaagaactc
attctgattgctcaggatctgacttattatggtttggatatctatggtaaacgtaaccta
tcagacctgatgcgtcatttgtccgatgtggatggcatcgaatggatccggctccagtac
gcttatccctccggttttcctatggacatactggacgccatgaatgaacgttccaatatc
tgtaactatttggatatgccattgcaacatatttccgatcctatgctgaaatcgatgcgc
agaggaacaaccaagcagaagcagatcgatcttgtccatgcaattcgggataaagtgccg
gatatagctttgcgcaccaccctaatctgcgggtatcccggtgagaccgaacaggacttt
caggagatgctggaatgggtcgaggaaacacgttttgaccgcctcggctgttttacctat
tcgcatgaagaaaaaacgcatgcttataccctcgaagatgatgtaccgcaagaagttaag
gaagaacgtgtagaagccatcatggaggtacagcagggtatttcatacgatattaatcag
accaaggtaggcaacagctataaagtactggtagaccgtatagatggtgactacttcatt
ggccgtacggaatacgattctccggaagttgataatgaggtattgatcgcagcagcagcg
tcctacgcccggataggggattttgttcaggtaaaaattgaccgcgccgaggatttcgat
ctatatggtgaaattatcaaaaaataa
DBGET
integrated database retrieval system
