Sphingobacterium thalpophilum: NCTC11429_01776
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Entry
NCTC11429_01776 CDS
T06778
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11429_01776 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_01776 (ung)
Enzymes [BR:
stha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC11429_01776 (ung)
DNA repair and recombination proteins [BR:
stha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11429_01776 (ung)
Prokaryotic type
NCTC11429_01776 (ung)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
MaAIMP_sms
Motif
Other DBs
NCBI-ProteinID:
VTR36888
UniProt:
A0A4V6KT15
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All DBs
Position
1:1991233..1991907
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AA seq
224 aa
AA seq
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MEKLYDDSWAPVLKPLFSQPYMKQLSAFVQEERRRTKVFPPAGLVMNAFKLTPLPDVKVV
ILGQDPYHNDGQAHGLSFSVPGGIALPPSLKNIFKELQDDIAGFTVPRSGDLSSWAKQGV
LLLNATLTVQAHLAGSHQKKGWEMFTDSIIHAISERCEHVVFLLWGSYAQQKSALIDTRK
HLVLKSVHPSPLSAHRGFFGSKHFSKANQYLKEHGKTPIDWRLS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctatatgatgattcgtgggcgccggtattgaaaccgttattcagccagcct
tatatgaaacaattgtctgcctttgtacaggaggagcgcaggcgtacaaaagtcttccca
cctgcggggttagtcatgaatgctttcaaattgactccgttgccagatgtcaaagttgtc
attctgggacaagatccttaccataatgatgggcaggcacatgggctgtctttttctgtg
cctggaggcatagctttgccgccttccttaaaaaatatttttaaagagctgcaggatgat
attgccggatttacagtgccgcgctccggggatttgagtagctgggcgaagcaaggggtg
ctgctgctgaacgctacattgaccgtgcaggcgcatctggctggctcacatcaaaagaaa
ggctgggaaatgtttacggatagtattatacatgctatttctgaacggtgtgaacacgtt
gttttcttgctatggggcagctatgcacagcagaaaagtgcacttattgacacgcgtaag
caccttgttctgaaatcggtgcatccgtcacctctttctgctcatcgaggtttttttggt
agcaaacacttttcgaaggccaatcaatatctgaaggaacatggtaaaacgccaattgac
tggcgtttgtcttaa
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