Sphingobacterium thalpophilum: NCTC11429_02125
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Entry
NCTC11429_02125 CDS
T06778
Symbol
lacZ_4
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00052
Galactose metabolism
stha00511
Other glycan degradation
stha00600
Sphingolipid metabolism
stha01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
NCTC11429_02125 (lacZ_4)
09103 Lipid metabolism
00600 Sphingolipid metabolism
NCTC11429_02125 (lacZ_4)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
NCTC11429_02125 (lacZ_4)
Enzymes [BR:
stha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
NCTC11429_02125 (lacZ_4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Glyco_hydro_2_N2
BetaGal_ABD2
TsiV
Motif
Other DBs
NCBI-ProteinID:
VTR39085
UniProt:
A0A4U9UYE6
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All DBs
Position
1:2420138..2423431
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AA seq
1097 aa
AA seq
DB search
MKINRYTIFCALSSLVLLLAGTVKGQTVDGKPAVIPPVPDGRIPEAWENPMITSINRDPS
RATAYSYATVEEALKNDRTNNKRMLFLNGDWDFKFVYKPADAPQNFHLEEVKGWDKIHVP
SNWEMQGYDIPIYRSAVYPFTPIDPPRIPKDYNGVGSYQKTFELPSSWEGMNITLHFGGV
TSAYQLWVNDKYVGYAEDSCLPSEFNVTPYLRKGKNRVSVQVLRWSDASYLEDQDHWRMS
GIHREVFLMAEPKVRIADFHWQATLDAAYRDAKFSLRPKIDNFSGDSISGFTLKAQLYDA
NNQAVLSKPLEKDAAAIFDEIYPRLDNVKFGLLETTLQNPKKWSPEEPNLYRLVLTLYDK
DNRLLEAKTCQVGFRTIAFSPQDGKLLINGRTTYLYGVNRHDHHPERGKALTREDMEADI
RQIKQFNFNAIRTSHYPNDPYIYELCDRYGIMVMDEANMETHGLGGKLMNDPAWLAALNE
RVVRMVQRDKNHPSIIIWSLGNESGRGPNTAAMAAWIHDFDITRPVHYEPAMGSHQLPGY
IDPSDPRYPKSNDHSHRLQNSKDQYYVDIVSRFYPGIFTPSLLLNQDNGDHRPILFVEYT
HSMGNSTGNIYDFWEIFRSRPRLIGGFIWDYKDQALVRNDSIYGKVLAYGGDFGEKVHNG
AFSLNGIVDAWNKPKAAMYENKRIYQPAEVTLADAEKISLNIKNRSAVLNLNHYDAVLLF
QRNGQLLKEVPIPAIDLAAGDSMQLAFARYLPFKRTADHEYQLDIQFRLREATAWAPRGF
VVSSSQVRLQERPNMLRKLPNTGSALKKTETTEDIQVAGKEFQVIFDKSTGSLSSFIYGG
QEVIKEAVRPNFTRPATDNDRRGWKPEKKLKYWYSEPKLVSLTAQPKGPDYEFRAQYALP
GDSAKVQVVYMVKSSGIVSVDYQLHVKAGLSNLPKVGLQMGINPTFEDIQYYGLGPMENY
PDRAYGFDLGVYHMNIDQLMEHYLYPQENGNRMDVRWMHLKGKNAGLLVVGQQPLSMSAW
PYSQQAIVAAKHWFKLKKEDKITLNVDLKQMGVGGNDTWTDVSQPLAKYQIPAKDYSYSF
YLIPTDQKRSIQQFVEN
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaccgatatactatattttgcgcgctgagcagcttggtgttgcttctggcg
ggtacagttaaaggacagacggtcgacggcaagcccgctgttatccctcctgtacctgat
ggaagaattccggaagcgtgggaaaatccgatgattacctcgatcaaccgagatccctca
cgagcgacagcttattcctatgcgacggtggaagaggcattaaaaaatgatcggacgaac
aataaacggatgctgtttttaaatggtgactgggactttaaattcgtatataaacccgct
gatgctcctcaaaattttcatctggaagaagtaaaaggctgggataagatccatgtccct
tccaattgggaaatgcaaggttacgatattccgatttaccgttcggcagtctacccgttt
acacctattgatccaccacggattccgaaagactataacggcgttggttcctaccaaaag
actttcgaacttccgtcgtcctgggaaggcatgaatattaccttgcatttcggcggtgtc
acttcagcttatcaactgtgggtcaatgacaaatatgttggctatgccgaagattcgtgt
ttaccctccgaattcaatgttacgccttaccttagaaaaggtaaaaaccgtgtctcggtt
caagtgctgcgctggagcgatgcgtcttatcttgaagaccaggatcattggcgtatgagt
ggcatccatcgggaagtattcctaatggccgaaccgaaggtgcgcattgcggatttccat
tggcaggcaacgttggatgcggcttatcgggacgccaaattctcccttcgcccaaagatt
gataatttctcgggcgacagcatcagtggcttcacgttgaaagcacagctttatgatgcc
aacaatcaagctgtcctgtccaaaccattggaaaaggatgctgcagcaatcttcgatgaa
atctatccaaggttggataatgtcaaatttggcttattggagacgactcttcaaaacccg
aagaaatggtcgccggaggaaccgaacctctaccgcttggtgttgaccttatatgataag
gacaatcgtctgctggaggccaagacctgtcaggtcgggtttcgtacgattgctttttcg
ccacaggatggtaagctattgattaacggtcggacaacttatctgtacggtgtaaatcgc
catgatcatcaccccgaacgggggaaagcgctgacgcgcgaagatatggaagcagatatt
cgtcagatcaaacaattcaactttaacgcgatcagaacttcacattatccgaatgacccc
tacatctatgagctgtgcgaccgttacggtattatggtgatggacgaagccaacatggaa
acgcatggcctcggggggaaattgatgaacgatccagcttggctcgcagccctgaatgaa
cgcgttgtacgtatggtacaaagagataaaaatcacccctctatcatcatctggtcactg
gggaatgaatcgggtagagggccgaatacagccgcaatggccgcgtggatacatgatttt
gatattacgcgtccagtacactacgaaccggcaatgggaagtcatcagctacccggatac
attgacccttcggatccgcgctatccaaagtccaatgatcattcgcatcgtcttcaaaat
agcaaagatcaatattatgttgatatcgtatcccgtttttatccggggattttcacgcca
tcacttttattaaatcaggataatggtgatcatcggcccattctgtttgtcgaatacacg
cattctatgggtaactcaacgggtaatatctacgatttttgggagatctttcgttccagg
ccgcgtctgataggaggttttatatgggactataaagatcaagcactggttcggaatgac
tccatttatgggaaggtactggcctatggtggtgactttggtgaaaaagtacataatggt
gcatttagccttaatggtatcgtagatgcatggaataaacccaaagcggctatgtatgaa
aataaacggatctatcagcccgcagaggttaccttggcggacgctgaaaagatcagcctg
aacattaaaaacagatcggctgtactgaacctaaatcattacgatgcagtcctgttgttc
cagagaaatggtcaacttctgaaagaagtgcccatacccgccattgatctggccgcagga
gattctatgcagctcgcttttgctcgctatctaccgtttaaacgaactgcagatcacgaa
tatcagcttgatatccaattccgtttgcgcgaggcgaccgcttgggcaccgagaggtttt
gtggtttcctcttcccaggttagattgcaggagcgacccaatatgttgcgtaagctgcca
aataccggaagtgcattgaagaaaaccgaaaccacagaagacattcaggtcgccggcaaa
gaatttcaggtaatctttgacaaatcaaccggaagtctgtcttcctttatttacggggga
caggaggtcattaaggaagctgtacgacctaacttcacaagaccggctaccgacaacgac
cgtcgcggatggaagccggagaaaaagctaaaatattggtatagcgaacccaaattggta
tcgctaactgcgcagccaaaaggtccagattacgaattccgggcccagtatgcattaccg
ggagattcggcgaaggtacaggtcgtgtatatggtcaaaagttcgggaattgtatccgtt
gattatcaactgcatgtaaaagctggtctgtctaacctgccaaaagtcggtctccaaatg
ggaatcaatcccacatttgaggatatacagtactatggcttaggaccaatggagaactat
cccgaccgtgcctatggttttgaccttggggtttaccatatgaacatcgatcaattgatg
gagcattatctttatccacaagaaaacggcaaccgcatggatgtacgctggatgcatctt
aagggtaaaaatgcgggtttactggtggttggccaacaacctttatctatgagcgcatgg
ccgtattcacagcaggctattgttgctgcgaaacattggtttaaattgaaaaaggaagat
aagatcactttaaatgtggatctcaagcaaatgggcgttggtggaaatgatacttggaca
gatgtgtcgcagccgctggcaaaatatcaaattccagcaaaagactacagctattcattt
tatttgattccaacggatcagaagcggtctatacaacaatttgttgaaaattaa
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integrated database retrieval system
