Sphingobacterium thalpophilum: NCTC11429_02234
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Entry
NCTC11429_02234 CDS
T06778
Symbol
cca
Name
(GenBank) Multifunctional CCA protein
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11429_02234 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stha03016
]
NCTC11429_02234 (cca)
Enzymes [BR:
stha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
NCTC11429_02234 (cca)
Transfer RNA biogenesis [BR:
stha03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
NCTC11429_02234 (cca)
Prokaryotic type
NCTC11429_02234 (cca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
VTR39759
UniProt:
A0A4U9V4G3
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All DBs
Position
1:2582482..2583915
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AA seq
477 aa
AA seq
DB search
MYDNLQHPIFTIIKELAEKTNTECYVIGGYVRDYLMQRPFKNDVDIVVVGSGIEFATLLG
EKLQTKVAVYKNFGTAMLVYDGLNVEFVGARRESYRANSRKPIVEDGTLADDQNRRDFTI
NAMAFSLNKADYGALVDPFNGVKDLEHRIIRTPLDPIETFSDDPLRMMRAIRFATQLNFK
IAIEAITAISETKDRIKIISKERIIDEINKIMLSTKPSVGFKYLFDTGLLELIFPAMYNL
HGVDIIDGKGHKDNFYHTLEVLDNVCEQSGDLWLRWAAVMHDIAKPATKRFDKKLGWTFH
GHEDRGARMVPKLFTELKLPLNEKMKFVQKLVQLHLRPIVLAQDIVTDSAVRRLLFEAGD
DIEALMMLCHADVTTKNEFKKKKYRQNFELVKQKLKDVEERDKIRNWQPPISGQDIMILF
GLTPGRTVGQLKNIIREAILEGEIPNSRIEAYHYLLQKAQDLGLTAKQEIPLEISNS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtacgataatttacaacatccaatatttacaatcatcaaagagcttgctgaaaagaca
aataccgaatgttacgtcatcggcggctatgtacgggactatctgatgcaacgtcctttc
aaaaatgacgtggatattgttgttgtgggaagtggtattgaatttgccaccttattaggt
gaaaaactgcagaccaaggtggctgtgtacaaaaactttggcactgccatgttggtgtac
gacggcctaaacgtggaatttgtcggcgccagaagagaatcgtatcgtgccaattcccga
aaaccgattgtggaagacggaacattggcggatgatcagaaccgccgcgattttaccatc
aatgcgatggctttttcgttaaataaagctgactacggtgccctggtggatcctttcaac
ggggtgaaggacctcgagcaccgcattattcggacaccgcttgatcccatagaaaccttt
tcggatgacccgctacgcatgatgcgtgcgattcgtttcgcaacgcagctgaacttcaaa
attgctatagaggccatcaccgcaatttccgaaaccaaagatcgtatcaaaatcatctcc
aaggaacggattattgatgagatcaataagatcatgctctccaccaaaccgtcggtggga
tttaaatacctttttgatacaggactgcttgaactgatttttccggcgatgtacaacctg
catggggtagacatcattgacggaaaaggacataaagacaacttctaccatacactggaa
gtgctggacaatgtttgcgagcaatctggcgatttatggctgcgctgggcggccgtcatg
catgatattgccaagcctgctacaaaacgctttgataaaaaactcggctggacgtttcac
ggacatgaagaccgtggtgcccgtatggtgcctaagctttttaccgaactgaaattgccg
ctcaatgaaaagatgaagtttgttcagaaactggtacagctgcacttgcgccctatcgtg
ctggcccaggatatcgtgacagactccgcagtgcgacgtctcttgtttgaggcgggggac
gatattgaagcgcttatgatgctttgccatgccgatgtgacaaccaagaatgagtttaaa
aagaaaaaatatcgacagaattttgagcttgtgaaacaaaagctcaaagatgttgaagaa
cgcgacaaaattcgtaactggcagcctcctatcagcggacaggatatcatgatcctgttt
gggctgacaccgggccgcacggtggggcagctaaaaaacataatccgggaggcgatattg
gaaggcgaaattcccaattcgcgaatcgaagcatatcactatctcctgcaaaaggcccaa
gatttaggcttaactgccaaacaagaaatcccattggaaatttccaattcttaa
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