Sphingobacterium thalpophilum: NCTC11429_02324
Help
Entry
NCTC11429_02324 CDS
T06778
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC11429_02324 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_02324 (priA)
Enzymes [BR:
stha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11429_02324 (priA)
DNA repair and recombination proteins [BR:
stha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11429_02324 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
WHD_PriA_bact
ResIII
Zn_ribbon_PriA
HTH_65
Helicase_C
PriA_C
nSTAND3
MED33_TPR-like_2nd
Penicillinase_R
DUF1344
TrmB
Motif
Other DBs
NCBI-ProteinID:
VTR40371
LinkDB
All DBs
Position
1:2686559..2689042
Genome browser
AA seq
827 aa
AA seq
DB search
MSDPQSTIFSERDTLFIDVVLPLALARTYTYRVPADWNDRIQVGVRVIVQFGRNKIYSAV
VKSISHEAPRHYEAKYILDIIDDQPIVNLAQFKLWDWLADYYMCSLGEVMQAALPAALKL
ASETKVALSMAADFDRTALSDKEYLIIEALEVAGELKVSDIVKLLGQKTVFPILKQLFDK
GLVLISEEIHERYKPKTKAFLRLAPDFRDEEAKRELLDSLNRAPKQQDAVLAFMQLVKRT
EDITRAMLVEASGCGNGAITALVDKGVFEIKEKVVSRFQGEDVDLDANFQFNEYQQRAYD
EIQQAFETKAVTLLHGVTASGKTQIYIRLIEQAIASGKSALYLLPEIALTAQITARLKLH
FGDKLGVYHSKFNDNERAEVWHKVMKNEFQVVIGARSSVFLPFQDLGIIIVDEEHETSYK
QFDPAPRYHARDTAIYLGFLHQSKVLLGSATPSLESYYNAKAKKYGFVQLLERYGNAQLP
SVELINIPEEGRKENMFSYFSGTLLQGIAEAVKNKEQVILFQNRRGHTTMIQCNTCGFVA
KCVNCDVSLTYHKSSNMMHCHYCGHAEPPLRVCPACGMPHIESKGFGTERVEEELELLMP
DVRIGRLDLDSTKGKYGFDKIITAFDEHEFDVLIGTQMVAKGLDFGRVSLIGVINADTII
NFPDFRSYERAFSLFSQVAGRAGRREGGGRVIIQSYTTKHRVLEQVVSNDYEGMFMTEIT
ERKNYFYPPFYRLIRIDIKHNDFQKCYDAANRFALALRQQLGTRVLGPEPPLVSRVRNNF
IQTITLKIERTNISIVKVKELIRSAVLDFEIDKANTGVRIQLDVDPY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccgcaatctacaatatttagtgaaagagataccttgtttattgatgtagtc
ttgcctttggcgctggcacgaacgtatacctaccgtgttcccgcggattggaatgaccgt
atacaggtcggggtaagagtcattgtgcagtttgggcgaaataaaatatattcggctgtc
gtcaagtcgatcagccatgaagcaccccgccattacgaggcgaaatatattctggatatc
attgatgatcagcctatcgtcaatctggcgcagtttaaattatgggactggctggcggat
tattacatgtgcagcttgggggaggtcatgcaagccgctctgcctgcggcattgaaactg
gcgagcgaaaccaaggttgccttatccatggcagctgactttgaccgtacggcactttcg
gataaagaatatttgattattgaagcgctggaggtggcgggcgaactcaaagtcagtgat
attgtgaagctactgggacaaaaaacagtatttccaatattgaagcagctgtttgataag
ggtctcgtccttatatcggaggagattcacgaacgatacaagccgaagaccaaagcattt
ttacgcctcgctccagattttagagatgaggaggccaagcgggaactcttggatagcctc
aaccgtgcgccaaagcagcaggatgctgtgctggccttcatgcagctcgtgaagcggacg
gaagatattacgcgcgcaatgctggtagaagcatccggttgcggtaatggcgcaattacc
gcccttgtcgataagggcgttttcgaaatcaaagaaaaagtggtttcccgatttcaggga
gaggatgtggaccttgatgccaactttcagtttaatgaatatcagcagcgggcttatgat
gagatccagcaagcttttgagacgaaggctgtgacgctgcttcacggcgtcacagcctcc
ggcaaaacgcagatctatatccggctgatcgaacaggcaatagcttccggtaaatccgct
ttatatcttttaccagaaattgcattgacggcgcagatcaccgcgcggttaaagctgcat
tttggagataaactgggggtctatcattctaagttcaatgacaatgaacgtgcagaagta
tggcataaggtgatgaaaaatgagtttcaggttgttatcggtgcccgttcatccgttttc
cttccctttcaggatctcggcattatcattgtcgatgaagaacatgagacttcgtacaag
cagtttgatcctgcgccgaggtatcatgcacgggatacggcgatctatcttggctttttg
catcaaagtaaagtactgctggggtcggcaacgccatctttggaaagctactataatgcc
aaggctaaaaagtacgggttcgtgcagttgctcgaacggtacgggaatgcacagctgcct
agtgtagagttaattaatatccccgaagaagggcgtaaggaaaatatgttttcttatttc
tccggcaccttattacaggggattgcggaagcggtcaaaaataaagagcaggtgatctta
tttcagaacagacgcggacataccacaatgatccagtgcaatacctgtggtttcgtcgct
aaatgcgtgaactgtgatgtcagtctcacctaccataaaagctcgaatatgatgcactgt
cactattgtggacatgcagagccgccgctacgagtctgtcctgcttgtggaatgccgcat
atcgagagtaagggctttgggaccgaacgtgtcgaagaggagctggagctgctgatgcca
gacgtccgaatcggccgccttgacctggattcaacgaaaggtaaatacggttttgacaag
atcatcactgcttttgatgagcacgaatttgatgtattgatcggtactcagatggttgcc
aaaggactggatttcgggcgtgtgagcctgatcggagtgatcaatgccgataccattatt
aattttcccgattttaggtcttacgaacgcgctttttcgctgttttctcaggtagctgga
cgcgcaggccgtagggaaggcggcgggagggtcatcattcaaagctacactaccaaacat
agagtgctggagcaggtggtcagcaacgactacgaaggtatgtttatgaccgagatcaca
gaacgcaaaaactatttctatccaccattctatcgcttgatccgtattgatatcaagcat
aatgatttccagaaatgttatgatgctgccaatcgttttgcgcttgcactgcgacaacag
ctcggcacacgggtattggggcctgagccgccactggtctcccgtgtccgcaacaatttt
atccagaccatcaccctaaaaattgaacggaccaacatcagtattgtgaaggtgaaggaa
ctgatccggtcggccgttctggattttgaaatcgataaggccaataccggtgtgcggata
cagctggatgttgacccgtattaa
DBGET
integrated database retrieval system
