Sphingobacterium thalpophilum: NCTC11429_02349
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Entry
NCTC11429_02349 CDS
T06778
Symbol
rlmF
Name
(GenBank) Ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stha03009
]
NCTC11429_02349 (rlmF)
Enzymes [BR:
stha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
NCTC11429_02349 (rlmF)
Ribosome biogenesis [BR:
stha03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC11429_02349 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
Eco57I
MTS
N6_Mtase
N6-adenineMlase
Cons_hypoth95
Methyltransf_31
UPF0020
Motif
Other DBs
NCBI-ProteinID:
VTR40502
UniProt:
A0A4U9V6L3
LinkDB
All DBs
Position
1:complement(2716828..2717739)
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AA seq
303 aa
AA seq
DB search
MADANPKKKLHPRNRHLDNYNFDELSKVEPSLKDFVTLNAYKVKTIDFNNPEAVKALNQA
LLKKYYNIQHWDIPQENLCPPIPGRADYIHYAADILARDNNGEIPKGGKVRILDIGVGAN
CIYPIIGHQEYGWSFVGSEIIKKAYKNAIEITRTNMSLKKSIQIRLQNNPKAIFKDIILP
DEKFDMVICNPPFFSSQTEALQQSIRKTTGIKDAKVGDSPVIQTFAGQGSELWCDGGEKA
FLTRMIFESQFHKDQVKWFSTLVAHREDVRFLLHKLKKINVKESEVIRMEQGNKVSRILL
WRF
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctaatcccaaaaagaaattacaccctcgaaatagacatctcgacaactac
aactttgacgaactcagcaaagtcgaaccttccttaaaagattttgttacattaaatgct
tacaaagtaaaaacaatcgactttaataatcccgaagcggtgaaagccttaaatcaggct
cttttaaaaaagtactacaacattcagcactgggatatccctcaggaaaacctttgtcct
cccattccgggcagggctgattacatccactacgccgcagacattctcgccagggacaac
aatggcgaaatcccaaagggcggcaaagtacgcatcctggatatcggcgtgggcgccaac
tgtatctatcccatcattggccaccaagagtacggatggagtttcgtaggctccgaaatc
attaaaaaagcctacaaaaacgcaattgaaattacccggacgaatatgagcctgaaaaaa
agcatacaaatacggctgcagaataatccaaaagccatcttcaaggatattattcttccc
gatgaaaaatttgatatggtcatctgcaacccaccctttttcagctcacaaactgaagca
ttgcaacagtctatacgcaagacaacgggtattaaagatgctaaggtaggcgacagccca
gtcatacagacatttgccggacaaggcagcgaactttggtgcgacggaggcgagaaagca
tttctcacgcgcatgatatttgaaagccaatttcataaagatcaggtgaaatggttttca
acattggtcgcacaccgtgaagatgtcagatttttactgcataaactaaagaaaatcaat
gtaaaagaatctgaagtcatccgtatggaacagggcaataaagtaagccggatcctcttg
tggagattttaa
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