KEGG   Sphingobacterium thalpophilum: NCTC11429_02358
Entry
NCTC11429_02358   CDS       T06778                                 
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
stha  Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:stha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stha03032]
    NCTC11429_02358 (gyrB_1)
   03036 Chromosome and associated proteins [BR:stha03036]
    NCTC11429_02358 (gyrB_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:stha02048]
    NCTC11429_02358 (gyrB_1)
Enzymes [BR:stha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NCTC11429_02358 (gyrB_1)
DNA replication proteins [BR:stha03032]
 Prokaryotic type
  DNA Topoisomerases
   NCTC11429_02358 (gyrB_1)
Chromosome and associated proteins [BR:stha03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    NCTC11429_02358 (gyrB_1)
Prokaryotic defense system [BR:stha02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    NCTC11429_02358 (gyrB_1)
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c HATPase_c_3 DNA_gyraseB_C
Other DBs
NCBI-ProteinID: VTR40564
UniProt: A0A4U9VBT8
LinkDB
Position
1:complement(2727242..2729095)
AA seq 617 aa
MSTYNEDSIRSLDWKEHIRLRPGMYIGKLGDGSAYDDGIYVLLKEVVDNSIDEFVMGAGK
TIDITVNENKVSVRDYGRGIPIGSVVDVVSKINTGGKYDSKAFQKSVGLNGVGTKAVNAL
SSQFTVQSYRQNITRIAQFSKGELISDEQKDTTQRNGTAVTFYPDDTIFRNYKYRLEFVE
NMIWNYVFLNAGLTINFNNKKFVSEHGLKDLLERNIDAESMRYPIIHLRGDDIEIAMTHG
QQYGEEYYSFVNGQHTTQGGTHQAAFREAIVKTVREFYRKEFDASDIRSSIIGAIAIKVQ
EPVFESQTKTKLGSQSVGPEGPTVRGFINDFVKKALDDYLHKNPATADALQKRILQSERE
RKDIAGIKKLANERAKKASLHNRKLRDCKIHFSDKNERNQETTLFITEGDSASGSITKSR
DVQTQAVFSLKGKPLNSYGMSKKIVYENEEFNLLQHALNIEDGLDGLRYNNIVIATDADV
DGMHIRLLLLTFFLQFFPDLVKAGHVSILQTPLFRVRNKKETIYCYSDEERQRAISKLGG
KPEITRFKGLGEISPSEFGLFIGKDIRLDPVILSKDNKIQQLLEYYMGKNTPDRQKHIVE
NLRVEVDLEEELTKKAG
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgagtacatacaacgaagacagcattaggtccctggattggaaagagcatatccgcctt
cgtccgggaatgtacattggaaagttgggggacggttcggcctatgacgatggcatctat
gttttattgaaagaagtcgtcgacaactcgattgacgaatttgtgatgggcgccggaaag
accatcgacattacggtaaacgaaaataaggtttcggtacgggattatggccggggtatt
ccaattggatctgtggtcgatgttgtttctaagatcaataccgggggtaaatatgatagt
aaggcgtttcagaagtctgttggcttgaatggtgtcggtaccaaagcggttaacgcgcta
tccagccagtttaccgtacagtcttatcgtcaaaatatcacccgcattgcgcaattctcc
aaaggcgaactgattagtgatgagcaaaaggacacgacacagcgcaatggcactgccgta
acattctaccctgacgacacgattttcagaaattacaaatacagacttgaatttgttgaa
aacatgatctggaattatgtttttctgaatgcaggtctaaccatcaattttaataacaaa
aagttcgtttccgaacatggtctgaaagatctgctggagcgcaatatcgatgccgagtcc
atgcgctatccaattattcacctgcggggtgatgacatcgagatcgctatgacccacggc
cagcaatatggtgaagaatattattcttttgtcaacgggcagcacaccacacagggcggt
acgcatcaggctgcctttcgtgaagccatcgtaaagacggttcgcgaattctatagaaaa
gaatttgatgcctcagatatacggtcttctattattggagcaattgccatcaaagtgcag
gaaccggttttcgaatcacagacgaaaacgaagctgggttctcaaagcgtaggtcctgaa
ggtccaacagtacgtggcttcatcaacgactttgtcaaaaaagcgctggatgactatctg
cacaaaaaccctgctacagcagatgcccttcagaaacgtattctgcagtcggaacgtgaa
cgcaaagatatcgccggcatcaagaaactggcaaatgagcgggcaaaaaaagcatcctta
cataaccgtaagctgcgtgattgtaaaattcactttagcgacaaaaacgaacgtaatcaa
gaaaccacactgtttatcacggaaggagattcggcctccggatcgattaccaaatcgcgg
gatgtacagacccaggcagttttcagtttgaaaggaaaaccgctaaactcctacggcatg
tccaaaaaaattgtgtatgagaatgaggaattcaacctgctacaacacgcacttaatatc
gaagatggcctggatggtttgcgctacaataatatcgtaatcgctaccgatgcggacgtt
gatggcatgcatatccggcttttgctgctaactttctttctgcagtttttcccggatctc
gtaaaagctgggcatgtgtctatcctacagacccccttattcagggtgcgcaacaaaaag
gaaaccatctactgttattccgacgaggaaaggcagcgggccatcagcaaactcggcggc
aagcccgaaatcacgcgctttaaagggcttggtgagatttctccgtccgaatttggcctg
tttatcggaaaagacatacgtctagatccggtcatcctgtcaaaagacaataagattcaa
caattattagagtattatatgggcaaaaatacaccggatcgacaaaaacacattgttgaa
aatctccgcgtggaagttgacctcgaagaagaactcacaaaaaaagcgggttaa

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