Sphingobacterium thalpophilum: NCTC11429_02625
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Entry
NCTC11429_02625 CDS
T06778
Symbol
gabR_2
Name
(GenBank) HTH-type transcriptional regulatory protein gabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stha03000
]
NCTC11429_02625 (gabR_2)
Transcription factors [BR:
stha03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC11429_02625 (gabR_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GntR
Aminotran_1_2
Asp_aminotransf
HTH_36
HTH_Crp_2
HTH_11
HTH_IclR
TrmB
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
VTR42016
UniProt:
A0A4U9V621
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All DBs
Position
1:complement(3010948..3012411)
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AA seq
487 aa
AA seq
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MYIWNSNPKERPMLRPWNLTITIDRHSAKAIYLQIAASISADIQSGRLSSGTALPSSRAL
ATQLGVNRNTVVEALQLLLSEGWLESQQRRGIFVAKELPPLYSGSTVDGTADTPQSHLRI
VFDDGNPDTRIAPIDQLARAYRQIFKRSARWKMMGYAEPCGHADFRQAIADMLNQERDMR
VTKDHLCVTRGSQMAMYLIAQCLLEPGDSILVESPGYCTAWKIFEHRGARLIEIPVDADG
ILVDEILPHLTAATNVKALYLTPHRQYPTTVTLSSHRRSQLIQLSNAFGFTIIEDDYDYE
FNFEQPPVFPLAASPVLQHSIYIGTLSKVVAPALRIGYLVSKSEQLLRNIAALRYLIDIQ
GDNIMEQAILELIRDGTIRRHIRKATDHYRQKRDLMVRLLEEHLQDHVHVHIPEGGLAVW
LSFKHQVDWTLLFKKLKRKSIQIPHPDNYGKSDSYGGLRLGYGSLSEELIEEGISELAQI
LKHARIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgtatatttggaacagtaacccaaaagaacgacccatgcttagaccctggaatttgacc
ataaccattgaccgacactccgcaaaggcgatttatttacagatagcagcgagcatttct
gctgatatacaatctggccggctgagcagcggcaccgctctgccgagtagccgggcacta
gccactcagttgggtgtaaaccgtaacacagtggtcgaagccctacaattgcttcttagc
gaaggctggctggagagtcagcagcggcgtggcatttttgtcgccaaagagctgccccct
ctgtactcaggatcaacagtggacggaacggcggatactccgcagtctcacctacgtatt
gtgttcgatgatggcaatccggacaccagaattgcgcctatagaccagcttgcgcgagca
tatcgccagatcttcaaacgaagtgcacgctggaaaatgatgggctacgccgaaccatgc
gggcatgctgatttccgtcaggccattgccgatatgctgaaccaggaacgcgatatgcgt
gttaccaaagaccatctttgtgtcacccggggtagccagatggccatgtaccttattgct
cagtgtctgcttgagcccggagatagcatcttggtcgaatcgccgggatactgtacggcc
tggaagatcttcgagcatcggggcgcgcggctcattgaaatccctgttgatgcagacggc
atccttgtagacgagatccttcctcatctcactgcggcaacaaatgtcaaagccttatat
ctgactccccatcgccagtatccaacgaccgtaaccctcagctcacatcggcggtcgcaa
ctcatccagctctccaacgcttttggatttacgattatcgaagatgactacgactatgaa
tttaattttgagcagccccccgtattccccttggctgcttcacccgttctacagcattct
atctatatcgggactttgagcaaagtggtagctcctgcgctccgtatcggttatctcgtc
agtaagagcgaacaattattacgcaatatagctgctttacgttaccttattgacatacaa
ggcgataatattatggagcaggctatactggaacttattcgggacggaacaatacgacgg
catatacgaaaagcgacagatcattatcggcaaaagcgcgatcttatggttcgcttgctc
gaagaacatctgcaggatcatgtccacgtccatattcctgaaggtggactcgcagtatgg
ctatccttcaaacatcaggtagattggacattactatttaaaaagctaaagcggaaatcg
atacagattccacaccccgacaactatggtaaaagcgatagctacggaggactgcgtttg
ggctatggatcactttcagaagaactgatcgaagaaggcatcagcgaattggcacagatt
ctaaaacatgcccggattagttag
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